Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:98132364-99902463

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1810006J02Rik 1 98131467 to 98144655 13188 + lincRNA gene RIKEN cDNA 1810006J02 gene
Gm29461 1 98173648 to 98190698 17050 + lincRNA gene predicted gene 29461
Gm7952 1 98263473 to 98264235 762 + pseudogene predicted gene 7952
Gm29462 1 98267151 to 98267438 287 + pseudogene predicted gene 29462
Gm46078 1 98289553 to 98292969 3416 + pseudogene predicted gene, 46078
Tssr169 1 98349893 to 98349894 1 + TSS region transcription start site region 169
Tssr8236 1 98421092 to 98421134 42 + TSS region transcription start site region 8236
Slco6d1 1 98421124 to 98516991 95867 + protein coding gene solute carrier organic anion transporter family, member 6d1
Tssr8237 1 98457715 to 98457748 33 + TSS region transcription start site region 8237
Gm3555 1 98457768 to 98459162 1394 + pseudogene predicted pseudogene 3555
D1Mit11 1 98547060 to 98547159 99 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 11
Gm26134 1 98549451 to 98549560 109 + miRNA gene predicted gene, 26134
Gm7967 1 98589517 to 98607384 17867 + lincRNA gene predicted gene 7967
Tssr8238 1 98693476 to 98693495 19 + TSS region transcription start site region 8238
Gm29460 1 98764841 to 98765554 713 + pseudogene predicted gene 29460
Gm23434 1 99017364 to 99017463 99 + snRNA gene predicted gene, 23434
D1Mit157 1 99614988 to 99615136 148 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 157
Gm18248 1 99638396 to 99640241 1845 - pseudogene predicted gene, 18248
Tssr13111 1 99650442 to 99650444 2 - TSS region transcription start site region 13111
D1Mit257 1 99749097 to 99749230 133 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 257
Tssr8239 1 99772394 to 99772408 14 + TSS region transcription start site region 8239
Tssr8240 1 99772429 to 99772438 9 + TSS region transcription start site region 8240
Tssr8241 1 99790200 to 99790203 3 + TSS region transcription start site region 8241
Prdx2-ps1 1 99790429 to 99791025 596 - pseudogene peroxiredoxin 2, pseudogene 1
Tssr13112 1 99791090 to 99791102 12 - TSS region transcription start site region 13112
Tssr13113 1 99791821 to 99791843 22 - TSS region transcription start site region 13113
Gm37877 1 99847984 to 99850692 2708 + unclassified gene predicted gene, 37877
Cntnap5b 1 100485942 to 99772765 -713177 + protein coding gene contactin associated protein-like 5B
Leusq5 1 126458780 to 98547060 -27911720 QTL leucocytosis susceptibility QTL 5