Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:98047060-99047159

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pam 1 97821091 to 98095658 274567 - protein coding gene peptidylglycine alpha-amidating monooxygenase
B230216N24Rik 1 98031123 to 98047793 16670 - lncRNA gene RIKEN cDNA B230216N24 gene
Tssr13102 1 98047716 to 98047727 11 - TSS region transcription start site region 13102
Tssr13103 1 98047728 to 98047792 64 - TSS region transcription start site region 13103
Tssr13104 1 98047793 to 98047817 24 - TSS region transcription start site region 13104
Gm24465 1 98049822 to 98049928 106 + snRNA gene predicted gene, 24465
Tssr13105 1 98057701 to 98057712 11 - TSS region transcription start site region 13105
Tssr13106 1 98057716 to 98057732 16 - TSS region transcription start site region 13106
Tssr8233 1 98060307 to 98060309 2 + TSS region transcription start site region 8233
Cpgi621 1 98094813 to 98096319 1506 CpG island CpG island 621
Tssr13107 1 98095506 to 98095533 27 - TSS region transcription start site region 13107
Tssr13108 1 98095538 to 98095553 15 - TSS region transcription start site region 13108
Tssr13109 1 98095574 to 98095592 18 - TSS region transcription start site region 13109
Tssr13110 1 98095596 to 98095648 52 - TSS region transcription start site region 13110
Tssr8234 1 98131444 to 98131458 14 + TSS region transcription start site region 8234
1810006J02Rik 1 98131467 to 98144655 13188 + lincRNA gene RIKEN cDNA 1810006J02 gene
Tssr8235 1 98131470 to 98131499 29 + TSS region transcription start site region 8235
Gm29461 1 98173648 to 98190698 17050 + lincRNA gene predicted gene 29461
Gm7952 1 98263473 to 98264235 762 + pseudogene predicted gene 7952
Gm29462 1 98267151 to 98267438 287 + pseudogene predicted gene 29462
Gm46078 1 98289553 to 98292969 3416 + pseudogene predicted gene, 46078
Tssr169 1 98349893 to 98349894 1 + TSS region transcription start site region 169
Tssr8236 1 98421092 to 98421134 42 + TSS region transcription start site region 8236
Slco6d1 1 98421124 to 98516991 95867 + protein coding gene solute carrier organic anion transporter family, member 6d1
Tssr8237 1 98457715 to 98457748 33 + TSS region transcription start site region 8237
Gm3555 1 98457768 to 98459162 1394 + pseudogene predicted pseudogene 3555
D1Mit11 1 98547060 to 98547159 99 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 11
Gm26134 1 98549451 to 98549560 109 + miRNA gene predicted gene, 26134
Gm7967 1 98589517 to 98607384 17867 + lincRNA gene predicted gene 7967
Tssr8238 1 98693476 to 98693495 19 + TSS region transcription start site region 8238
Gm29460 1 98764841 to 98765554 713 + pseudogene predicted gene 29460
Gm23434 1 99017364 to 99017463 99 + snRNA gene predicted gene, 23434
Leusq5 1 126458780 to 98547060 -27911720 QTL leucocytosis susceptibility QTL 5