Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:9801944-10002558

30 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sgk3	1	9798107 to 9900845	102738	+	protein coding gene	serum/glucocorticoid regulated kinase 3
Gm6195	1	9802197 to 9802553	356	-	pseudogene	predicted pseudogene 6195
Tssr5916	1	9807006 to 9807014	8	+	TSS region	transcription start site region 5916
Gm22607	1	9834498 to 9834602	104	-	snRNA gene	predicted gene, 22607
Tssr5917	1	9836048 to 9836052	4	+	TSS region	transcription start site region 5917
Cpgi28	1	9848038 to 9848775	737		CpG island	CpG island 28
Tssr5918	1	9848270 to 9848285	15	+	TSS region	transcription start site region 5918
Tssr5919	1	9848294 to 9848362	68	+	TSS region	transcription start site region 5919
Tssr5920	1	9848375 to 9848398	23	+	TSS region	transcription start site region 5920
Gm2352	1	9901944 to 9902558	614	+	pseudogene	predicted gene 2352
Mcmdc2	1	9908638 to 9942085	33447	+	protein coding gene	minichromosome maintenance domain containing 2
Tssr5921	1	9908654 to 9908669	15	+	TSS region	transcription start site region 5921
Tssr5922	1	9908679 to 9908686	7	+	TSS region	transcription start site region 5922
Tssr5923	1	9932092 to 9932107	15	+	TSS region	transcription start site region 5923
Snhg6	1	9942025 to 9944118	2093	-	lincRNA gene	small nucleolar RNA host gene 6
Tssr10945	1	9942155 to 9942167	12	-	TSS region	transcription start site region 10945
Snord87	1	9942470 to 9942543	73	-	snoRNA gene	small nucleolar RNA, C/D box 87
Tssr10946	1	9942537 to 9942550	13	-	TSS region	transcription start site region 10946
Tssr10947	1	9943590 to 9943608	18	-	TSS region	transcription start site region 10947
Cpgi29	1	9943688 to 9944485	797		CpG island	CpG island 29
Tssr10948	1	9944087 to 9944090	3	-	TSS region	transcription start site region 10948
Tssr10949	1	9944104 to 9944127	23	-	TSS region	transcription start site region 10949
Tcf24	1	9960163 to 9967932	7769	-	protein coding gene	transcription factor 24
Cpgi30	1	9966928 to 9968423	1495		CpG island	CpG island 30
E330040D14Rik	1	9967314 to 9968687	1373	+	unclassified gene	RIKEN cDNA E330040D14 gene
Tssr10950	1	9967805 to 9967815	10	-	TSS region	transcription start site region 10950
Gm15818	1	9982387 to 9992366	9979	+	antisense lncRNA gene	predicted gene 15818
Tssr10951	1	9991919 to 9991930	11	-	TSS region	transcription start site region 10951
Tssr10952	1	9991936 to 9991949	13	-	TSS region	transcription start site region 10952
Ppp1r42	1	10009136 to 9968624	-40512	-	protein coding gene	protein phosphatase 1, regulatory subunit 42