Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:97880596-98310648

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pam 1 97821091 to 98095658 274567 - protein coding gene peptidylglycine alpha-amidating monooxygenase
Tssr13088 1 97885652 to 97885662 10 - TSS region transcription start site region 13088
Tssr13089 1 97908615 to 97908619 4 - TSS region transcription start site region 13089
Tssr13090 1 97910722 to 97910744 22 - TSS region transcription start site region 13090
Tssr13091 1 97910745 to 97910775 30 - TSS region transcription start site region 13091
Gm31771 1 97911103 to 97924920 13817 + lncRNA gene predicted gene, 31771
Gm25413 1 97936400 to 97936711 311 + unclassified non-coding RNA gene predicted gene, 25413
Gm3531 1 97948901 to 97949389 488 - pseudogene predicted pseudogene 3531
Tssr13092 1 97949502 to 97949506 4 - TSS region transcription start site region 13092
Cpgi620 1 97976768 to 97977435 667 CpG island CpG island 620
Tssr13093 1 97976955 to 97976991 36 - TSS region transcription start site region 13093
Tssr13094 1 97977034 to 97977058 24 - TSS region transcription start site region 13094
Tssr13095 1 97977061 to 97977113 52 - TSS region transcription start site region 13095
Tssr13096 1 97977138 to 97977202 64 - TSS region transcription start site region 13096
Tssr13097 1 97977210 to 97977227 17 - TSS region transcription start site region 13097
Tssr13098 1 97977233 to 97977279 46 - TSS region transcription start site region 13098
Tssr13099 1 97977284 to 97977298 14 - TSS region transcription start site region 13099
Tssr13100 1 97977302 to 97977332 30 - TSS region transcription start site region 13100
Tssr13101 1 97977338 to 97977398 60 - TSS region transcription start site region 13101
B230216N24Rik 1 98031123 to 98047793 16670 - lncRNA gene RIKEN cDNA B230216N24 gene
Tssr13102 1 98047716 to 98047727 11 - TSS region transcription start site region 13102
Tssr13103 1 98047728 to 98047792 64 - TSS region transcription start site region 13103
Tssr13104 1 98047793 to 98047817 24 - TSS region transcription start site region 13104
Gm24465 1 98049822 to 98049928 106 + snRNA gene predicted gene, 24465
Tssr13105 1 98057701 to 98057712 11 - TSS region transcription start site region 13105
Tssr13106 1 98057716 to 98057732 16 - TSS region transcription start site region 13106
Tssr8233 1 98060307 to 98060309 2 + TSS region transcription start site region 8233
Cpgi621 1 98094813 to 98096319 1506 CpG island CpG island 621
Tssr13107 1 98095506 to 98095533 27 - TSS region transcription start site region 13107
Tssr13108 1 98095538 to 98095553 15 - TSS region transcription start site region 13108
Tssr13109 1 98095574 to 98095592 18 - TSS region transcription start site region 13109
Tssr13110 1 98095596 to 98095648 52 - TSS region transcription start site region 13110
Tssr8234 1 98131444 to 98131458 14 + TSS region transcription start site region 8234
1810006J02Rik 1 98131467 to 98144655 13188 + lincRNA gene RIKEN cDNA 1810006J02 gene
Tssr8235 1 98131470 to 98131499 29 + TSS region transcription start site region 8235
Gm29461 1 98173648 to 98190698 17050 + lincRNA gene predicted gene 29461
Gm7952 1 98263473 to 98264235 762 + pseudogene predicted gene 7952
Gm29462 1 98267151 to 98267438 287 + pseudogene predicted gene 29462
Gm46078 1 98289553 to 98292969 3416 + pseudogene predicted gene, 46078