Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:97781103-98054920

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gin1 1 97770172 to 97793709 23537 + protein coding gene gypsy retrotransposon integrase 1
Pam 1 97821091 to 98095658 274567 - protein coding gene peptidylglycine alpha-amidating monooxygenase
Tssr13086 1 97821441 to 97821446 5 - TSS region transcription start site region 13086
Tssr13087 1 97822998 to 97823015 17 - TSS region transcription start site region 13087
Gm37140 1 97878382 to 97880065 1683 - unclassified gene predicted gene, 37140
Tssr13088 1 97885652 to 97885662 10 - TSS region transcription start site region 13088
Tssr13089 1 97908615 to 97908619 4 - TSS region transcription start site region 13089
Tssr13090 1 97910722 to 97910744 22 - TSS region transcription start site region 13090
Tssr13091 1 97910745 to 97910775 30 - TSS region transcription start site region 13091
Gm31771 1 97911103 to 97924920 13817 + lncRNA gene predicted gene, 31771
Gm25413 1 97936400 to 97936711 311 + unclassified non-coding RNA gene predicted gene, 25413
Gm3531 1 97948901 to 97949389 488 - pseudogene predicted pseudogene 3531
Tssr13092 1 97949502 to 97949506 4 - TSS region transcription start site region 13092
Cpgi620 1 97976768 to 97977435 667 CpG island CpG island 620
Tssr13093 1 97976955 to 97976991 36 - TSS region transcription start site region 13093
Tssr13094 1 97977034 to 97977058 24 - TSS region transcription start site region 13094
Tssr13095 1 97977061 to 97977113 52 - TSS region transcription start site region 13095
Tssr13096 1 97977138 to 97977202 64 - TSS region transcription start site region 13096
Tssr13097 1 97977210 to 97977227 17 - TSS region transcription start site region 13097
Tssr13098 1 97977233 to 97977279 46 - TSS region transcription start site region 13098
Tssr13099 1 97977284 to 97977298 14 - TSS region transcription start site region 13099
Tssr13100 1 97977302 to 97977332 30 - TSS region transcription start site region 13100
Tssr13101 1 97977338 to 97977398 60 - TSS region transcription start site region 13101
B230216N24Rik 1 98031123 to 98047793 16670 - lncRNA gene RIKEN cDNA B230216N24 gene
Tssr13102 1 98047716 to 98047727 11 - TSS region transcription start site region 13102
Tssr13103 1 98047728 to 98047792 64 - TSS region transcription start site region 13103
Tssr13104 1 98047793 to 98047817 24 - TSS region transcription start site region 13104
Gm24465 1 98049822 to 98049928 106 + snRNA gene predicted gene, 24465