Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:96802860-97670664

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slco4c1 1 96816270 to 96872171 55901 - protein coding gene solute carrier organic anion transporter family, member 4C1
Panct2 1 96871126 to 96881234 10108 + antisense lncRNA gene pluripotency-associated noncoding transcript 2
Cpgi617 1 96871864 to 96872505 641 CpG island CpG island 617
Tssr13064 1 96872107 to 96872147 40 - TSS region transcription start site region 13064
Tssr13065 1 96872165 to 96872179 14 - TSS region transcription start site region 13065
Tssr8227 1 96872225 to 96872253 28 + TSS region transcription start site region 8227
Tssr8228 1 96872259 to 96872297 38 + TSS region transcription start site region 8228
Slco6b1 1 96906176 to 96997560 91384 - pseudogene solute carrier organic anion transporter family, member 6b1
D1Mit306 1 96930958 to 96931066 108 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 306
Nabq1 1 96930958 to 96931066 108 QTL nasal bone morphology QTL 1
Wbcq4 1 96930958 to 96931066 108 QTL white blood cell QTL 4
Tssr13066 1 96997590 to 96997595 5 - TSS region transcription start site region 13066
Tssr13067 1 96997596 to 96997610 14 - TSS region transcription start site region 13067
Gm9499 1 97001820 to 97002783 963 - pseudogene predicted gene 9499
Tssr8229 1 97024398 to 97024416 18 + TSS region transcription start site region 8229
Gm28901 1 97024516 to 97025565 1049 - lincRNA gene predicted gene 28901
Gm6430 1 97024681 to 97025928 1247 + pseudogene predicted gene 6430
Slco6c1 1 97059447 to 97128339 68892 - protein coding gene solute carrier organic anion transporter family, member 6c1
D1Mit185 1 97066223 to 97066366 143 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 185
Tssr13068 1 97128249 to 97128256 7 - TSS region transcription start site region 13068
Tssr13069 1 97128268 to 97128291 23 - TSS region transcription start site region 13069
Tssr13070 1 97128292 to 97128313 21 - TSS region transcription start site region 13070
Tssr13071 1 97128323 to 97128328 5 - TSS region transcription start site region 13071
Gm7133 1 97162860 to 97310664 147804 + pseudogene predicted gene 7133
D1Mit337 1 97166202 to 97166411 209 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 337
Gm7135 1 97346182 to 97479109 132927 + pseudogene predicted gene 7135
Gm37171 1 97544264 to 97545448 1184 - unclassified gene predicted gene, 37171
Tssr8230 1 97563716 to 97563730 14 + TSS region transcription start site region 8230
A930009E08Rik 1 97637470 to 97642871 5401 - lncRNA gene RIKEN cDNA A930009E08 gene
D1Ertd622e 1 97643902 to 97662018 18116 - protein coding gene DNA segment, Chr 1, ERATO Doi 622, expressed
Tssr13072 1 97645513 to 97645522 9 - TSS region transcription start site region 13072
Cpgi618 1 97660493 to 97662540 2047 CpG island CpG island 618
Tssr13073 1 97661021 to 97661033 12 - TSS region transcription start site region 13073
Tssr13074 1 97661344 to 97661434 90 - TSS region transcription start site region 13074
Tssr13075 1 97661624 to 97661635 11 - TSS region transcription start site region 13075
Tssr13076 1 97661668 to 97661699 31 - TSS region transcription start site region 13076
Tssr13077 1 97661950 to 97662013 63 - TSS region transcription start site region 13077