Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:96182099-97052205

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi616 1 96264257 to 96264536 279 CpG island CpG island 616
Gm24586 1 96266853 to 96266941 88 - miRNA gene predicted gene, 24586
Gm22917 1 96303146 to 96303255 109 + miRNA gene predicted gene, 22917
Tssr167 1 96313241 to 96313242 1 + TSS region transcription start site region 167
Gm37076 1 96313242 to 96315535 2293 + unclassified gene predicted gene, 37076
Tssr168 1 96507107 to 96507111 4 + TSS region transcription start site region 168
Gm29601 1 96543281 to 96556729 13448 - lincRNA gene predicted gene 29601
Gm30490 1 96548341 to 96549996 1655 - lncRNA gene predicted gene, 30490
Tssr13063 1 96556718 to 96556728 10 - TSS region transcription start site region 13063
4930533P14Rik 1 96612057 to 96662573 50516 - lincRNA gene RIKEN cDNA 4930533P14 gene
D1Mit336 1 96615325 to 96615443 118 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 336
Gm26245 1 96617099 to 96617205 106 + snRNA gene predicted gene, 26245
Gm1833 1 96645420 to 96646170 750 + pseudogene predicted gene 1833
Gm26078 1 96762031 to 96762158 127 + snoRNA gene predicted gene, 26078
Slco4c1 1 96816270 to 96872171 55901 - protein coding gene solute carrier organic anion transporter family, member 4C1
Panct2 1 96871126 to 96881234 10108 + antisense lncRNA gene pluripotency-associated noncoding transcript 2
Cpgi617 1 96871864 to 96872505 641 CpG island CpG island 617
Tssr13064 1 96872107 to 96872147 40 - TSS region transcription start site region 13064
Tssr13065 1 96872165 to 96872179 14 - TSS region transcription start site region 13065
Tssr8227 1 96872225 to 96872253 28 + TSS region transcription start site region 8227
Tssr8228 1 96872259 to 96872297 38 + TSS region transcription start site region 8228
Slco6b1 1 96906176 to 96997560 91384 - pseudogene solute carrier organic anion transporter family, member 6b1
D1Mit306 1 96930958 to 96931066 108 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 306
Wbcq4 1 96930958 to 96931066 108 QTL white blood cell QTL 4
Nabq1 1 96930958 to 96931066 108 QTL nasal bone morphology QTL 1
Tssr13066 1 96997590 to 96997595 5 - TSS region transcription start site region 13066
Tssr13067 1 96997596 to 96997610 14 - TSS region transcription start site region 13067
Gm9499 1 97001820 to 97002783 963 - pseudogene predicted gene 9499
Tssr8229 1 97024398 to 97024416 18 + TSS region transcription start site region 8229
Gm28901 1 97024516 to 97025565 1049 - lincRNA gene predicted gene 28901
Gm6430 1 97024681 to 97025928 1247 + pseudogene predicted gene 6430