Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:93830636-95400704

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D2hgdh 1 93824909 to 93852348 27439 + protein coding gene D-2-hydroxyglutarate dehydrogenase
Tssr8206 1 93831166 to 93831170 4 + TSS region transcription start site region 8206
Tssr8207 1 93859846 to 93859866 20 + TSS region transcription start site region 8207
Gal3st2 1 93861344 to 93876494 15150 + protein coding gene galactose-3-O-sulfotransferase 2
Gm30204 1 93890091 to 93898973 8882 + lncRNA gene predicted gene, 30204
Gm18666 1 93906809 to 93916968 10159 + pseudogene predicted gene, 18666
Gal3st2b 1 93918437 to 93942645 24208 + protein coding gene galactose-3-O-sulfotransferase 2B
Gm7889 1 93975353 to 93985816 10463 + pseudogene predicted gene 7889
Gal3st2c 1 93990509 to 94011539 21030 + protein coding gene galactose-3-O-sulfotransferase 2C
Tssr8208 1 93996256 to 93996280 24 + TSS region transcription start site region 8208
9130414P19Rik 1 94015049 to 94017146 2097 unclassified gene RIKEN cDNA 9130414P19 gene
Tssr8209 1 94016908 to 94016912 4 + TSS region transcription start site region 8209
Tssr8210 1 94020459 to 94020485 26 + TSS region transcription start site region 8210
Neu4 1 94020493 to 94028334 7841 + protein coding gene sialidase 4
Cpgi612 1 94022436 to 94022960 524 CpG island CpG island 612
Cpgi613 1 94035275 to 94035488 213 CpG island CpG island 613
Tssr13055 1 94035483 to 94035491 8 - TSS region transcription start site region 13055
Pdcd1 1 94038305 to 94052553 14248 - protein coding gene programmed cell death 1
Tssr13056 1 94052557 to 94052573 16 - TSS region transcription start site region 13056
Tssr13057 1 94052577 to 94052587 10 - TSS region transcription start site region 13057
Tssr8211 1 94075168 to 94075173 5 + TSS region transcription start site region 8211
Tssr8212 1 94075188 to 94075196 8 + TSS region transcription start site region 8212
Tssr8213 1 94077023 to 94077027 4 + TSS region transcription start site region 8213
Gm7891 1 94204417 to 94205259 842 + pseudogene predicted gene 7891
Gm7895 1 94468715 to 94469887 1172 - pseudogene predicted gene 7895
D1Mit489 1 94513548 to 94513657 109 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 489
Gm23389 1 94615636 to 94615704 68 - snoRNA gene predicted gene, 23389
4930440C22Rik 1 94797442 to 94802472 5030 + lincRNA gene RIKEN cDNA 4930440C22 gene
Gm23181 1 95039934 to 95040043 109 - snoRNA gene predicted gene, 23181
D1Ertd399e 1 95201677 to 95201926 249 DNA segment DNA segment, Chr 1, ERATO Doi 399, expressed
Gm5264 1 95255963 to 95256810 847 - pseudogene predicted gene 5264
Cpgi614 1 95313428 to 95314376 948 CpG island CpG island 614
Tssr8214 1 95313607 to 95313677 70 + TSS region transcription start site region 8214
Fam174a 1 95313628 to 95335284 21656 + protein coding gene family with sequence similarity 174, member A
Tssr8215 1 95313678 to 95313704 26 + TSS region transcription start site region 8215
Tssr13058 1 95314055 to 95314072 17 - TSS region transcription start site region 13058
Tssr8216 1 95314087 to 95314100 13 + TSS region transcription start site region 8216
Tssr8217 1 95314106 to 95314122 16 + TSS region transcription start site region 8217
Tssr8218 1 95314124 to 95314143 19 + TSS region transcription start site region 8218
Tssr8219 1 95314150 to 95314161 11 + TSS region transcription start site region 8219
BC055308 1 95328681 to 95331218 2537 + unclassified gene cDNA sequence BC055308