Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:93802577-94302587

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi609 1 93803435 to 93804718 1283 CpG island CpG island 609
Tssr13053 1 93803770 to 93803817 47 - TSS region transcription start site region 13053
Tssr8201 1 93803945 to 93803998 53 + TSS region transcription start site region 8201
Ing5 1 93803965 to 93822101 18136 + protein coding gene inhibitor of growth family, member 5
Gm22089 1 93808570 to 93808671 101 - snRNA gene predicted gene, 22089
Tssr8202 1 93811809 to 93811846 37 + TSS region transcription start site region 8202
Cpgi610 1 93824876 to 93825683 807 CpG island CpG island 610
D2hgdh 1 93824909 to 93852348 27439 + protein coding gene D-2-hydroxyglutarate dehydrogenase
Tssr8203 1 93825230 to 93825251 21 + TSS region transcription start site region 8203
Tssr8204 1 93825270 to 93825305 35 + TSS region transcription start site region 8204
Tssr13054 1 93825463 to 93825490 27 - TSS region transcription start site region 13054
Tssr8205 1 93825612 to 93825632 20 + TSS region transcription start site region 8205
Cpgi611 1 93826370 to 93826659 289 CpG island CpG island 611
Tssr8206 1 93831166 to 93831170 4 + TSS region transcription start site region 8206
Tssr8207 1 93859846 to 93859866 20 + TSS region transcription start site region 8207
Gal3st2 1 93861344 to 93876494 15150 + protein coding gene galactose-3-O-sulfotransferase 2
Gm30204 1 93890091 to 93898973 8882 + lncRNA gene predicted gene, 30204
Gm18666 1 93906809 to 93916968 10159 + pseudogene predicted gene, 18666
Gal3st2b 1 93918437 to 93942645 24208 + protein coding gene galactose-3-O-sulfotransferase 2B
Gm7889 1 93975353 to 93985816 10463 + pseudogene predicted gene 7889
Gal3st2c 1 93990509 to 94011539 21030 + protein coding gene galactose-3-O-sulfotransferase 2C
Tssr8208 1 93996256 to 93996280 24 + TSS region transcription start site region 8208
9130414P19Rik 1 94015049 to 94017146 2097 unclassified gene RIKEN cDNA 9130414P19 gene
Tssr8209 1 94016908 to 94016912 4 + TSS region transcription start site region 8209
Tssr8210 1 94020459 to 94020485 26 + TSS region transcription start site region 8210
Neu4 1 94020493 to 94028334 7841 + protein coding gene sialidase 4
Cpgi612 1 94022436 to 94022960 524 CpG island CpG island 612
Cpgi613 1 94035275 to 94035488 213 CpG island CpG island 613
Tssr13055 1 94035483 to 94035491 8 - TSS region transcription start site region 13055
Pdcd1 1 94038305 to 94052553 14248 - protein coding gene programmed cell death 1
Tssr13056 1 94052557 to 94052573 16 - TSS region transcription start site region 13056
Tssr13057 1 94052577 to 94052587 10 - TSS region transcription start site region 13057
Tssr8211 1 94075168 to 94075173 5 + TSS region transcription start site region 8211
Tssr8212 1 94075188 to 94075196 8 + TSS region transcription start site region 8212
Tssr8213 1 94077023 to 94077027 4 + TSS region transcription start site region 8213
Gm7891 1 94204417 to 94205259 842 + pseudogene predicted gene 7891