Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:93770509-94231539

43 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Atg4b	1	93755033 to 93789529	34496	+	protein coding gene	autophagy related 4B, cysteine peptidase
Dtymk	1	93792576 to 93801934	9358	-	protein coding gene	deoxythymidylate kinase
D1Ertd203	1	93792676 to 93792922	246		DNA segment	DNA segment, Chr 1, ERATO Doi 203
Tssr13051	1	93799358 to 93799370	12	-	TSS region	transcription start site region 13051
Cpgi608	1	93801605 to 93802292	687		CpG island	CpG island 608
Tssr13052	1	93801840 to 93801945	105	-	TSS region	transcription start site region 13052
Tssr8200	1	93802151 to 93802167	16	+	TSS region	transcription start site region 8200
Cpgi609	1	93803435 to 93804718	1283		CpG island	CpG island 609
Tssr13053	1	93803770 to 93803817	47	-	TSS region	transcription start site region 13053
Tssr8201	1	93803945 to 93803998	53	+	TSS region	transcription start site region 8201
Ing5	1	93803965 to 93822101	18136	+	protein coding gene	inhibitor of growth family, member 5
Gm22089	1	93808570 to 93808671	101	-	snRNA gene	predicted gene, 22089
Tssr8202	1	93811809 to 93811846	37	+	TSS region	transcription start site region 8202
Cpgi610	1	93824876 to 93825683	807		CpG island	CpG island 610
D2hgdh	1	93824909 to 93852348	27439	+	protein coding gene	D-2-hydroxyglutarate dehydrogenase
Tssr8203	1	93825230 to 93825251	21	+	TSS region	transcription start site region 8203
Tssr8204	1	93825270 to 93825305	35	+	TSS region	transcription start site region 8204
Tssr13054	1	93825463 to 93825490	27	-	TSS region	transcription start site region 13054
Tssr8205	1	93825612 to 93825632	20	+	TSS region	transcription start site region 8205
Cpgi611	1	93826370 to 93826659	289		CpG island	CpG island 611
Tssr8206	1	93831166 to 93831170	4	+	TSS region	transcription start site region 8206
Tssr8207	1	93859846 to 93859866	20	+	TSS region	transcription start site region 8207
Gal3st2	1	93861344 to 93876494	15150	+	protein coding gene	galactose-3-O-sulfotransferase 2
Gm30204	1	93890091 to 93898973	8882	+	lncRNA gene	predicted gene, 30204
Gm18666	1	93906809 to 93916968	10159	+	pseudogene	predicted gene, 18666
Gal3st2b	1	93918437 to 93942645	24208	+	protein coding gene	galactose-3-O-sulfotransferase 2B
Gm7889	1	93975353 to 93985816	10463	+	pseudogene	predicted gene 7889
Gal3st2c	1	93990509 to 94011539	21030	+	protein coding gene	galactose-3-O-sulfotransferase 2C
Tssr8208	1	93996256 to 93996280	24	+	TSS region	transcription start site region 8208
9130414P19Rik	1	94015049 to 94017146	2097		unclassified gene	RIKEN cDNA 9130414P19 gene
Tssr8209	1	94016908 to 94016912	4	+	TSS region	transcription start site region 8209
Tssr8210	1	94020459 to 94020485	26	+	TSS region	transcription start site region 8210
Neu4	1	94020493 to 94028334	7841	+	protein coding gene	sialidase 4
Cpgi612	1	94022436 to 94022960	524		CpG island	CpG island 612
Cpgi613	1	94035275 to 94035488	213		CpG island	CpG island 613
Tssr13055	1	94035483 to 94035491	8	-	TSS region	transcription start site region 13055
Pdcd1	1	94038305 to 94052553	14248	-	protein coding gene	programmed cell death 1
Tssr13056	1	94052557 to 94052573	16	-	TSS region	transcription start site region 13056
Tssr13057	1	94052577 to 94052587	10	-	TSS region	transcription start site region 13057
Tssr8211	1	94075168 to 94075173	5	+	TSS region	transcription start site region 8211
Tssr8212	1	94075188 to 94075196	8	+	TSS region	transcription start site region 8212
Tssr8213	1	94077023 to 94077027	4	+	TSS region	transcription start site region 8213
Gm7891	1	94204417 to 94205259	842	+	pseudogene	predicted gene 7891