Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:93485460-93686000

39 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sept2	1	93478968 to 93509733	30765	+	protein coding gene	septin 2
Tssr165	1	93489932 to 93489934	2	+	TSS region	transcription start site region 165
Tssr8181	1	93501568 to 93501581	13	+	TSS region	transcription start site region 8181
Tssr8182	1	93507880 to 93507895	15	+	TSS region	transcription start site region 8182
Tssr8183	1	93509125 to 93509157	32	+	TSS region	transcription start site region 8183
Tssr8184	1	93509162 to 93509179	17	+	TSS region	transcription start site region 8184
Cpgi603	1	93511526 to 93512695	1169		CpG island	CpG island 603
Tssr166	1	93511913 to 93511920	7	-	TSS region	transcription start site region 166
Tssr8185	1	93512088 to 93512125	37	+	TSS region	transcription start site region 8185
Farp2	1	93512104 to 93621976	109872	+	protein coding gene	FERM, RhoGEF and pleckstrin domain protein 2
Tssr8186	1	93512128 to 93512156	28	+	TSS region	transcription start site region 8186
Gm37250	1	93531815 to 93534202	2387	+	unclassified gene	predicted gene, 37250
D1Mit534	1	93544151 to 93544281	130		DNA segment	DNA Segment, Chr 1, Massachusetts Institute of Technology 534
Gm41920	1	93550299 to 93554685	4386	+	lncRNA gene	predicted gene, 41920
Gm18874	1	93585460 to 93586000	540	-	pseudogene	predicted gene, 18874
D1Mit60	1	93609133 to 93609275	142		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 60
Stk25	1	93620751 to 93654216	33465	-	protein coding gene	serine/threonine kinase 25 (yeast)
Tssr13034	1	93621996 to 93622000	4	-	TSS region	transcription start site region 13034
Cpgi604	1	93634905 to 93636204	1299		CpG island	CpG island 604
Tssr13035	1	93635107 to 93635117	10	-	TSS region	transcription start site region 13035
Tssr13036	1	93635137 to 93635188	51	-	TSS region	transcription start site region 13036
Tssr8187	1	93635169 to 93635210	41	+	TSS region	transcription start site region 8187
Gm28536	1	93635193 to 93636509	1316	+	antisense lncRNA gene	predicted gene 28536
Tssr13037	1	93635621 to 93635632	11	-	TSS region	transcription start site region 13037
Tssr13038	1	93635641 to 93635652	11	-	TSS region	transcription start site region 13038
Tssr13039	1	93635659 to 93635674	15	-	TSS region	transcription start site region 13039
Tssr13040	1	93635692 to 93635711	19	-	TSS region	transcription start site region 13040
Tssr13041	1	93635750 to 93635761	11	-	TSS region	transcription start site region 13041
Tssr13042	1	93654144 to 93654155	11	-	TSS region	transcription start site region 13042
Tssr13043	1	93654198 to 93654212	14	-	TSS region	transcription start site region 13043
Cpgi605	1	93668883 to 93669112	229		CpG island	CpG island 605
Cpgi606	1	93685409 to 93686934	1525		CpG island	CpG island 606
Tssr8188	1	93685468 to 93685484	16	+	TSS region	transcription start site region 8188
Tssr8189	1	93685574 to 93685678	104	+	TSS region	transcription start site region 8189
Bok	1	93685660 to 93695764	10104	+	protein coding gene	BCL2-related ovarian killer
Tssr8190	1	93685683 to 93685709	26	+	TSS region	transcription start site region 8190
Tssr8191	1	93685738 to 93685807	69	+	TSS region	transcription start site region 8191
Tssr8192	1	93685906 to 93685929	23	+	TSS region	transcription start site region 8192
Tir6	1	120601949 to 93609133	-26992816		QTL	trypanosome infection response 6