Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:93076410-93277064

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kif1a 1 93015455 to 93101893 86438 - protein coding gene kinesin family member 1A
Tssr13004 1 93083971 to 93083974 3 - TSS region transcription start site region 13004
Cpgi593 1 93100169 to 93102233 2064 CpG island CpG island 593
Tssr13005 1 93101810 to 93101821 11 - TSS region transcription start site region 13005
Tssr13006 1 93101825 to 93101849 24 - TSS region transcription start site region 13006
Tssr13007 1 93101854 to 93101879 25 - TSS region transcription start site region 13007
Gm36472 1 93114811 to 93115895 1084 + lncRNA gene predicted gene, 36472
Gm28086 1 93122931 to 93124103 1172 - lincRNA gene predicted gene 28086
Agxt 1 93135240 to 93145421 10181 + protein coding gene alanine-glyoxylate aminotransferase
Tssr8158 1 93135244 to 93135256 12 + TSS region transcription start site region 8158
Tssr8159 1 93135310 to 93135326 16 + TSS region transcription start site region 8159
Tssr8160 1 93135332 to 93135339 7 + TSS region transcription start site region 8160
Mab21l4 1 93151349 to 93160948 9599 - protein coding gene mab-21-like 4
Tssr13008 1 93160192 to 93160203 11 - TSS region transcription start site region 13008
Tssr13009 1 93160234 to 93160245 11 - TSS region transcription start site region 13009
Tssr13010 1 93160267 to 93160285 18 - TSS region transcription start site region 13010
Tssr13011 1 93160839 to 93160851 12 - TSS region transcription start site region 13011
Tssr13012 1 93160907 to 93160955 48 - TSS region transcription start site region 13012
Tssr8161 1 93168598 to 93168619 21 + TSS region transcription start site region 8161
Crocc2 1 93168725 to 93231072 62347 + protein coding gene ciliary rootlet coiled-coil, rootletin family member 2
Cpgi594 1 93176410 to 93177064 654 CpG island CpG island 594
Tssr8162 1 93211722 to 93211724 2 + TSS region transcription start site region 8162
Tssr8163 1 93217465 to 93217467 2 + TSS region transcription start site region 8163
Cpgi595 1 93223934 to 93224323 389 CpG island CpG island 595
Tssr8164 1 93227519 to 93227530 11 + TSS region transcription start site region 8164
Cpgi596 1 93235416 to 93236795 1379 CpG island CpG island 596
Tssr8165 1 93235836 to 93235842 6 + TSS region transcription start site region 8165
Sned1 1 93235841 to 93301065 65224 + protein coding gene sushi, nidogen and EGF-like domains 1
Tssr8166 1 93238869 to 93238873 4 + TSS region transcription start site region 8166
Mir6901 1 93274549 to 93274610 61 + miRNA gene microRNA 6901