Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:93061854-93141879

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kif1a 1 93015455 to 93101893 86438 - protein coding gene kinesin family member 1A
Tssr12998 1 93068679 to 93068719 40 - TSS region transcription start site region 12998
Tssr12999 1 93071012 to 93071021 9 - TSS region transcription start site region 12999
Cpgi592 1 93071637 to 93071863 226 CpG island CpG island 592
Tssr13000 1 93073091 to 93073104 13 - TSS region transcription start site region 13000
Tssr13001 1 93076197 to 93076208 11 - TSS region transcription start site region 13001
Tssr13002 1 93076226 to 93076238 12 - TSS region transcription start site region 13002
Tssr13003 1 93076243 to 93076255 12 - TSS region transcription start site region 13003
Tssr13004 1 93083971 to 93083974 3 - TSS region transcription start site region 13004
Cpgi593 1 93100169 to 93102233 2064 CpG island CpG island 593
Tssr13005 1 93101810 to 93101821 11 - TSS region transcription start site region 13005
Tssr13006 1 93101825 to 93101849 24 - TSS region transcription start site region 13006
Tssr13007 1 93101854 to 93101879 25 - TSS region transcription start site region 13007
Gm36472 1 93114811 to 93115895 1084 + lncRNA gene predicted gene, 36472
Gm28086 1 93122931 to 93124103 1172 - lincRNA gene predicted gene 28086
Agxt 1 93135240 to 93145421 10181 + protein coding gene alanine-glyoxylate aminotransferase
Tssr8158 1 93135244 to 93135256 12 + TSS region transcription start site region 8158
Tssr8159 1 93135310 to 93135326 16 + TSS region transcription start site region 8159
Tssr8160 1 93135332 to 93135339 7 + TSS region transcription start site region 8160