Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:91643722-92114666

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr12954 1 91650699 to 91650738 39 - TSS region transcription start site region 12954
Tssr8105 1 91653410 to 91653414 4 + TSS region transcription start site region 8105
Tssr8106 1 91720881 to 91720911 30 + TSS region transcription start site region 8106
Gm29100 1 91798528 to 91802937 4409 - antisense lncRNA gene predicted gene 29100
Cpgi581 1 91800503 to 91802765 2262 CpG island CpG island 581
Tssr8107 1 91801453 to 91801487 34 + TSS region transcription start site region 8107
Twist2 1 91801461 to 91848028 46567 + protein coding gene twist basic helix-loop-helix transcription factor 2
Tssr8108 1 91801491 to 91801508 17 + TSS region transcription start site region 8108
Tssr8109 1 91801518 to 91801536 18 + TSS region transcription start site region 8109
Gm46117 1 91813046 to 91832688 19642 - lncRNA gene predicted gene, 46117
Gm29101 1 91822515 to 91823985 1470 + sense intronic lncRNA gene predicted gene 29101
Gm46242 1 91878722 to 91879666 944 - lncRNA gene predicted gene, 46242
D1Mit84 1 91909897 to 91910147 250 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 84
Gm37600 1 91916260 to 91919551 3291 + unclassified gene predicted gene, 37600
Hdac4 1 91928779 to 92195670 266891 - protein coding gene histone deacetylase 4
Tssr12955 1 91931172 to 91931176 4 - TSS region transcription start site region 12955
Gm37048 1 91975987 to 91981564 5577 + unclassified gene predicted gene, 37048
Tssr12956 1 91978486 to 91978489 3 - TSS region transcription start site region 12956
Tssr12957 1 91984655 to 91984663 8 - TSS region transcription start site region 12957
Tssr8110 1 91984781 to 91984790 9 + TSS region transcription start site region 8110
Gm26720 1 91989051 to 91992628 3577 + lincRNA gene predicted gene, 26720
Tssr12958 1 92006844 to 92006883 39 - TSS region transcription start site region 12958
Gm37036 1 92019592 to 92022097 2505 - unclassified gene predicted gene, 37036
Tssr12959 1 92048521 to 92048528 7 - TSS region transcription start site region 12959
Tssr8111 1 92048709 to 92048720 11 + TSS region transcription start site region 8111
Tssr159 1 92048749 to 92048755 6 + TSS region transcription start site region 159
Tssr12960 1 92048954 to 92049000 46 - TSS region transcription start site region 12960
Tssr12961 1 92049004 to 92049040 36 - TSS region transcription start site region 12961
Tssr160 1 92049085 to 92049093 8 - TSS region transcription start site region 160
Tssr8112 1 92049093 to 92049104 11 + TSS region transcription start site region 8112
Tssr8113 1 92049118 to 92049121 3 + TSS region transcription start site region 8113
Tssr8114 1 92049130 to 92049156 26 + TSS region transcription start site region 8114
Tssr8115 1 92052498 to 92052547 49 + TSS region transcription start site region 8115
Tssr8116 1 92058935 to 92058948 13 + TSS region transcription start site region 8116
Tssr8117 1 92058970 to 92058977 7 + TSS region transcription start site region 8117
Tssr12962 1 92113327 to 92113334 7 - TSS region transcription start site region 12962
Tssr12963 1 92114615 to 92114619 4 - TSS region transcription start site region 12963