Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:91501406-91734500

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Traf3ip1 1 91494647 to 91529307 34660 + protein coding gene TRAF3 interacting protein 1
Tssr8094 1 91528032 to 91528036 4 + TSS region transcription start site region 8094
Tssr8095 1 91538733 to 91538772 39 + TSS region transcription start site region 8095
Cpgi580 1 91539765 to 91541414 1649 CpG island CpG island 580
Tssr8096 1 91540006 to 91540009 3 + TSS region transcription start site region 8096
Tssr8097 1 91540011 to 91540020 9 + TSS region transcription start site region 8097
Tssr8098 1 91540025 to 91540051 26 + TSS region transcription start site region 8098
Tssr8099 1 91540054 to 91540057 3 + TSS region transcription start site region 8099
Tssr12953 1 91540375 to 91540393 18 - TSS region transcription start site region 12953
Asb1 1 91540544 to 91559589 19045 + protein coding gene ankyrin repeat and SOCS box-containing 1
Tssr8100 1 91540553 to 91540578 25 + TSS region transcription start site region 8100
Tssr8101 1 91540687 to 91540761 74 + TSS region transcription start site region 8101
Tssr8102 1 91541044 to 91541049 5 + TSS region transcription start site region 8102
Tssr8103 1 91541074 to 91541089 15 + TSS region transcription start site region 8103
Tssr158 1 91611356 to 91611367 11 + TSS region transcription start site region 158
Gm28380 1 91611406 to 91624500 13094 + lincRNA gene predicted gene 28380
Tssr8104 1 91626353 to 91626393 40 + TSS region transcription start site region 8104
Tssr12954 1 91650699 to 91650738 39 - TSS region transcription start site region 12954
Tssr8105 1 91653410 to 91653414 4 + TSS region transcription start site region 8105
Tssr8106 1 91720881 to 91720911 30 + TSS region transcription start site region 8106
Reb1 1 100485942 to 91540544 -8945398 QTL repetitive behavior 1