Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:91454631-91534698

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Per2 1 91415982 to 91459324 43342 - protein coding gene period circadian clock 2
Tssr156 1 91456405 to 91456409 4 - TSS region transcription start site region 156
Tssr12948 1 91456462 to 91456473 11 - TSS region transcription start site region 12948
Tssr12949 1 91456530 to 91456550 20 - TSS region transcription start site region 12949
Tssr8086 1 91456775 to 91456789 14 + TSS region transcription start site region 8086
Tssr8087 1 91456805 to 91456812 7 + TSS region transcription start site region 8087
Tssr12950 1 91458241 to 91458251 10 - TSS region transcription start site region 12950
Tssr12951 1 91458273 to 91458289 16 - TSS region transcription start site region 12951
Tssr8088 1 91458557 to 91458563 6 + TSS region transcription start site region 8088
Cpgi578 1 91458577 to 91459921 1344 CpG island CpG island 578
Tssr12952 1 91459254 to 91459336 82 - TSS region transcription start site region 12952
Tssr157 1 91459471 to 91459489 18 + TSS region transcription start site region 157
Gm28381 1 91469906 to 91470098 192 - pseudogene predicted gene 28381
Tssr8089 1 91483017 to 91483030 13 + TSS region transcription start site region 8089
Gm28382 1 91483024 to 91484774 1750 + lincRNA gene predicted gene 28382
Gm19085 1 91487729 to 91490009 2280 - pseudogene predicted gene, 19085
Cpgi579 1 91494201 to 91495399 1198 CpG island CpG island 579
Tssr8090 1 91494596 to 91494624 28 + TSS region transcription start site region 8090
Tssr8091 1 91494631 to 91494698 67 + TSS region transcription start site region 8091
Traf3ip1 1 91494647 to 91529307 34660 + protein coding gene TRAF3 interacting protein 1
Tssr8092 1 91494706 to 91494721 15 + TSS region transcription start site region 8092
Tssr8093 1 91500802 to 91500859 57 + TSS region transcription start site region 8093
Tssr8094 1 91528032 to 91528036 4 + TSS region transcription start site region 8094