Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:91433024-91534774

26 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Per2	1	91415982 to 91459324	43342	-	protein coding gene	period circadian clock 2
Tssr155	1	91437956 to 91437983	27	+	TSS region	transcription start site region 155
Tssr8085	1	91442877 to 91442905	28	+	TSS region	transcription start site region 8085
Gm35591	1	91446118 to 91453750	7632	+	lncRNA gene	predicted gene, 35591
Tssr156	1	91456405 to 91456409	4	-	TSS region	transcription start site region 156
Tssr12948	1	91456462 to 91456473	11	-	TSS region	transcription start site region 12948
Tssr12949	1	91456530 to 91456550	20	-	TSS region	transcription start site region 12949
Tssr8086	1	91456775 to 91456789	14	+	TSS region	transcription start site region 8086
Tssr8087	1	91456805 to 91456812	7	+	TSS region	transcription start site region 8087
Tssr12950	1	91458241 to 91458251	10	-	TSS region	transcription start site region 12950
Tssr12951	1	91458273 to 91458289	16	-	TSS region	transcription start site region 12951
Tssr8088	1	91458557 to 91458563	6	+	TSS region	transcription start site region 8088
Cpgi578	1	91458577 to 91459921	1344		CpG island	CpG island 578
Tssr12952	1	91459254 to 91459336	82	-	TSS region	transcription start site region 12952
Tssr157	1	91459471 to 91459489	18	+	TSS region	transcription start site region 157
Gm28381	1	91469906 to 91470098	192	-	pseudogene	predicted gene 28381
Tssr8089	1	91483017 to 91483030	13	+	TSS region	transcription start site region 8089
Gm28382	1	91483024 to 91484774	1750	+	lincRNA gene	predicted gene 28382
Gm19085	1	91487729 to 91490009	2280	-	pseudogene	predicted gene, 19085
Cpgi579	1	91494201 to 91495399	1198		CpG island	CpG island 579
Tssr8090	1	91494596 to 91494624	28	+	TSS region	transcription start site region 8090
Tssr8091	1	91494631 to 91494698	67	+	TSS region	transcription start site region 8091
Traf3ip1	1	91494647 to 91529307	34660	+	protein coding gene	TRAF3 interacting protein 1
Tssr8092	1	91494706 to 91494721	15	+	TSS region	transcription start site region 8092
Tssr8093	1	91500802 to 91500859	57	+	TSS region	transcription start site region 8093
Tssr8094	1	91528032 to 91528036	4	+	TSS region	transcription start site region 8094