Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:91027307-91187318

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrrfip1 1 90998737 to 91128944 130207 + protein coding gene leucine rich repeat (in FLII) interacting protein 1
Tssr8026 1 91044420 to 91044437 17 + TSS region transcription start site region 8026
Tssr8027 1 91044450 to 91044462 12 + TSS region transcription start site region 8027
Tssr8028 1 91044465 to 91044480 15 + TSS region transcription start site region 8028
Tssr8029 1 91044486 to 91044498 12 + TSS region transcription start site region 8029
Tssr8030 1 91049526 to 91049536 10 + TSS region transcription start site region 8030
Tssr8031 1 91049683 to 91049705 22 + TSS region transcription start site region 8031
Cpgi568 1 91052510 to 91053728 1218 CpG island CpG island 568
Tssr12924 1 91052816 to 91052828 12 - TSS region transcription start site region 12924
Tssr12925 1 91052834 to 91052846 12 - TSS region transcription start site region 12925
Tssr12926 1 91052854 to 91052872 18 - TSS region transcription start site region 12926
Tssr12927 1 91052887 to 91052898 11 - TSS region transcription start site region 12927
Tssr12928 1 91053037 to 91053048 11 - TSS region transcription start site region 12928
Tssr8032 1 91053174 to 91053192 18 + TSS region transcription start site region 8032
Tssr8033 1 91053422 to 91053520 98 + TSS region transcription start site region 8033
Tssr8034 1 91053522 to 91053532 10 + TSS region transcription start site region 8034
Tssr8035 1 91053545 to 91053550 5 + TSS region transcription start site region 8035
Tssr8036 1 91053551 to 91053562 11 + TSS region transcription start site region 8036
Tssr12929 1 91053846 to 91053850 4 - TSS region transcription start site region 12929
Tssr8037 1 91053973 to 91053992 19 + TSS region transcription start site region 8037
Tssr12930 1 91056492 to 91056508 16 - TSS region transcription start site region 12930
Tssr8038 1 91056589 to 91056597 8 + TSS region transcription start site region 8038
Tssr8039 1 91056622 to 91056636 14 + TSS region transcription start site region 8039
Tssr8040 1 91056647 to 91056668 21 + TSS region transcription start site region 8040
Tssr8041 1 91056673 to 91056696 23 + TSS region transcription start site region 8041
Tssr12931 1 91057710 to 91057734 24 - TSS region transcription start site region 12931
Tssr8042 1 91057888 to 91057898 10 + TSS region transcription start site region 8042
Tssr8043 1 91057933 to 91057943 10 + TSS region transcription start site region 8043
Tssr12932 1 91062515 to 91062527 12 - TSS region transcription start site region 12932
Tssr8044 1 91062738 to 91062751 13 + TSS region transcription start site region 8044
Tssr12933 1 91063239 to 91063256 17 - TSS region transcription start site region 12933
Tssr8045 1 91068547 to 91068574 27 + TSS region transcription start site region 8045
Tssr8046 1 91073700 to 91073705 5 + TSS region transcription start site region 8046
Tssr8047 1 91083483 to 91083487 4 + TSS region transcription start site region 8047
Tssr12934 1 91091626 to 91091635 9 - TSS region transcription start site region 12934
Tssr12935 1 91091639 to 91091657 18 - TSS region transcription start site region 12935
Tssr8048 1 91093524 to 91093536 12 + TSS region transcription start site region 8048
Tssr8049 1 91093561 to 91093568 7 + TSS region transcription start site region 8049
Tssr8050 1 91107307 to 91107318 11 + TSS region transcription start site region 8050
Tssr8051 1 91114794 to 91114806 12 + TSS region transcription start site region 8051
Tssr8052 1 91115293 to 91115310 17 + TSS region transcription start site region 8052
Tssr8053 1 91116662 to 91116687 25 + TSS region transcription start site region 8053
Tssr8054 1 91121734 to 91121747 13 + TSS region transcription start site region 8054
Cpgi569 1 91144846 to 91145170 324 CpG island CpG island 569
Tssr8055 1 91144970 to 91144988 18 + TSS region transcription start site region 8055
Tssr8056 1 91145057 to 91145101 44 + TSS region transcription start site region 8056
Rbm44 1 91145089 to 91170795 25706 + protein coding gene RNA binding motif protein 44
Tssr8057 1 91145104 to 91145115 11 + TSS region transcription start site region 8057
Gm35443 1 91147451 to 91147745 294 + pseudogene predicted gene, 35443
Gm7776 1 91171429 to 91172148 719 - pseudogene predicted gene 7776
Tssr8058 1 91177719 to 91177723 4 + TSS region transcription start site region 8058
Cpgi570 1 91179621 to 91180434 813 CpG island CpG island 570
Ramp1 1 91179822 to 91225196 45374 + protein coding gene receptor (calcitonin) activity modifying protein 1
Tssr8059 1 91180004 to 91180024 20 + TSS region transcription start site region 8059
Tssr8060 1 91180025 to 91180055 30 + TSS region transcription start site region 8060
Tssr8061 1 91180058 to 91180067 9 + TSS region transcription start site region 8061
Tssr12936 1 91183476 to 91183485 9 - TSS region transcription start site region 12936