Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:90815085-91051142

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Col6a3 1 90766860 to 90843971 77111 - protein coding gene collagen, type VI, alpha 3
Tssr12917 1 90822421 to 90822424 3 - TSS region transcription start site region 12917
Gm36970 1 90837275 to 90839133 1858 - unclassified gene predicted gene, 36970
Tssr12918 1 90843916 to 90843983 67 - TSS region transcription start site region 12918
Tssr12919 1 90843992 to 90844004 12 - TSS region transcription start site region 12919
Tssr8020 1 90857987 to 90858000 13 + TSS region transcription start site region 8020
Tssr8021 1 90858006 to 90858018 12 + TSS region transcription start site region 8021
4930474B08Rik 1 90870583 to 90871419 836 - unclassified gene RIKEN cDNA 4930474B08 gene
Gm35381 1 90887867 to 90909237 21370 - lncRNA gene predicted gene, 35381
Cpgi565 1 90914861 to 90915153 292 CpG island CpG island 565
Tssr8022 1 90915064 to 90915114 50 + TSS region transcription start site region 8022
Mlph 1 90915085 to 90951142 36057 + protein coding gene melanophilin
Tssr8023 1 90915115 to 90915135 20 + TSS region transcription start site region 8023
Cpgi566 1 90928208 to 90928379 171 CpG island CpG island 566
Prlh 1 90953108 to 90954027 919 + protein coding gene prolactin releasing hormone
Rab17 1 90958133 to 90969661 11528 - protein coding gene RAB17, member RAS oncogene family
Tssr12920 1 90969383 to 90969402 19 - TSS region transcription start site region 12920
Tssr12921 1 90969429 to 90969471 42 - TSS region transcription start site region 12921
Tssr12922 1 90969607 to 90969631 24 - TSS region transcription start site region 12922
Gm28199 1 90974459 to 90975260 801 - lincRNA gene predicted gene 28199
Cpgi567 1 90998268 to 90999491 1223 CpG island CpG island 567
Tssr8024 1 90998722 to 90998796 74 + TSS region transcription start site region 8024
Lrrfip1 1 90998737 to 91128944 130207 + protein coding gene leucine rich repeat (in FLII) interacting protein 1
Tssr8025 1 91022722 to 91022727 5 + TSS region transcription start site region 8025
Tssr12923 1 91024071 to 91024088 17 - TSS region transcription start site region 12923
Tssr8026 1 91044420 to 91044437 17 + TSS region transcription start site region 8026
Tssr8027 1 91044450 to 91044462 12 + TSS region transcription start site region 8027
Tssr8028 1 91044465 to 91044480 15 + TSS region transcription start site region 8028
Tssr8029 1 91044486 to 91044498 12 + TSS region transcription start site region 8029
Tssr8030 1 91049526 to 91049536 10 + TSS region transcription start site region 8030
Tssr8031 1 91049683 to 91049705 22 + TSS region transcription start site region 8031