Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:89977132-90218401

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15 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Asb18 1 89952295 to 90014666 62371 - protein coding gene ankyrin repeat and SOCS box-containing 18
Cpgi560 1 89991869 to 89993325 1456 CpG island CpG island 560
Gm34616 1 90004228 to 90007361 3133 + lncRNA gene predicted gene, 34616
Tssr8014 1 90005190 to 90005194 4 + TSS region transcription start site region 8014
Cpgi561 1 90006655 to 90006888 233 CpG island CpG island 561
Tssr12909 1 90014485 to 90014507 22 - TSS region transcription start site region 12909
Tssr12910 1 90014604 to 90014634 30 - TSS region transcription start site region 12910
Iqca 1 90042132 to 90153401 111269 - protein coding gene IQ motif containing with AAA domain
D1Mit488 1 90071749 to 90071872 123 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 488
Tssr12911 1 90153396 to 90153406 10 - TSS region transcription start site region 12911
Tssr12912 1 90153426 to 90153442 16 - TSS region transcription start site region 12912
4930434B07Rik 1 90153628 to 90159462 5834 + lincRNA gene RIKEN cDNA 4930434B07 gene
Cpgi562 1 90203858 to 90204132 274 CpG island CpG island 562
Ackr3 1 90203980 to 90215724 11744 + protein coding gene atypical chemokine receptor 3
Tssr8015 1 90203995 to 90204012 17 + TSS region transcription start site region 8015