Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:89942132-90253401

25 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi558	1	89941564 to 89942355	791		CpG island	CpG island 558
Asb18	1	89952295 to 90014666	62371	-	protein coding gene	ankyrin repeat and SOCS box-containing 18
Gm41915	1	89962520 to 89966561	4041	-	lncRNA gene	predicted gene, 41915
Cpgi559	1	89967716 to 89969209	1493		CpG island	CpG island 559
Tssr12906	1	89968274 to 89968315	41	-	TSS region	transcription start site region 12906
Tssr12907	1	89968686 to 89968690	4	-	TSS region	transcription start site region 12907
Tssr12908	1	89968718 to 89968729	11	-	TSS region	transcription start site region 12908
Cpgi560	1	89991869 to 89993325	1456		CpG island	CpG island 560
Gm34616	1	90004228 to 90007361	3133	+	lncRNA gene	predicted gene, 34616
Tssr8014	1	90005190 to 90005194	4	+	TSS region	transcription start site region 8014
Cpgi561	1	90006655 to 90006888	233		CpG island	CpG island 561
Tssr12909	1	90014485 to 90014507	22	-	TSS region	transcription start site region 12909
Tssr12910	1	90014604 to 90014634	30	-	TSS region	transcription start site region 12910
Iqca	1	90042132 to 90153401	111269	-	protein coding gene	IQ motif containing with AAA domain
D1Mit488	1	90071749 to 90071872	123		DNA segment	DNA Segment, Chr 1 Massachusetts Institute of Technology 488
Tssr12911	1	90153396 to 90153406	10	-	TSS region	transcription start site region 12911
Tssr12912	1	90153426 to 90153442	16	-	TSS region	transcription start site region 12912
4930434B07Rik	1	90153628 to 90159462	5834	+	lincRNA gene	RIKEN cDNA 4930434B07 gene
Cpgi562	1	90203858 to 90204132	274		CpG island	CpG island 562
Ackr3	1	90203980 to 90215724	11744	+	protein coding gene	atypical chemokine receptor 3
Tssr8015	1	90203995 to 90204012	17	+	TSS region	transcription start site region 8015
Cpgi563	1	90222239 to 90222391	152		CpG island	CpG island 563
Gm38277	1	90227160 to 90228526	1366	-	unclassified gene	predicted gene, 38277
Gm34930	1	90247265 to 90261655	14390	+	lncRNA gene	predicted gene, 34930
Tssr8016	1	90252721 to 90252726	5	+	TSS region	transcription start site region 8016