Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:89633463-89933468

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Agap1 1 89454811 to 89895282 440471 + protein coding gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
Cpgi549 1 89644128 to 89644301 173 CpG island CpG island 549
Tssr8004 1 89659334 to 89659363 29 + TSS region transcription start site region 8004
4933400F21Rik 1 89676507 to 89683892 7385 - lncRNA gene RIKEN cDNA 4933400F21 gene
Tssr12901 1 89683869 to 89683904 35 - TSS region transcription start site region 12901
Gm26037 1 89684802 to 89685112 310 + unclassified non-coding RNA gene predicted gene, 26037
Tssr8005 1 89737697 to 89737702 5 + TSS region transcription start site region 8005
Tssr8006 1 89738206 to 89738230 24 + TSS region transcription start site region 8006
Tssr8007 1 89746996 to 89747004 8 + TSS region transcription start site region 8007
Tssr8008 1 89767727 to 89767746 19 + TSS region transcription start site region 8008
Tssr8009 1 89783463 to 89783468 5 + TSS region transcription start site region 8009
Tssr8010 1 89791264 to 89791268 4 + TSS region transcription start site region 8010
Gm37521 1 89825481 to 89827525 2044 + unclassified gene predicted gene, 37521
Tssr8011 1 89866396 to 89866401 5 + TSS region transcription start site region 8011
Tssr8012 1 89871107 to 89871137 30 + TSS region transcription start site region 8012
Cpgi550 1 89922863 to 89923678 815 CpG island CpG island 550
Cpgi551 1 89926931 to 89927615 684 CpG island CpG island 551
Gbx2 1 89927962 to 89931176 3214 - protein coding gene gastrulation brain homeobox 2
Cpgi552 1 89928626 to 89929088 462 CpG island CpG island 552
Cpgi553 1 89929888 to 89931942 2054 CpG island CpG island 553
Tssr8013 1 89930211 to 89930249 38 + TSS region transcription start site region 8013
D130058E05Rik 1 89930234 to 89933290 3056 + unclassified non-coding RNA gene RIKEN cDNA D130058E05 gene
Tssr12902 1 89930683 to 89930708 25 - TSS region transcription start site region 12902
Tssr12903 1 89931153 to 89931168 15 - TSS region transcription start site region 12903
Tssr12904 1 89931181 to 89931198 17 - TSS region transcription start site region 12904
Cpgi554 1 89932035 to 89932317 282 CpG island CpG island 554