Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:88469648-88699661

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cia15 1 65849847 to 88568379 22718532 QTL collagen induced arthritis QTL 15
Tssr7972 1 88472384 to 88472388 4 + TSS region transcription start site region 7972
Tssr7973 1 88472402 to 88472412 10 + TSS region transcription start site region 7973
Glrp1 1 88499871 to 88510066 10195 - protein coding gene glutamine repeat protein 1
Tssr12878 1 88509895 to 88509934 39 - TSS region transcription start site region 12878
Gm19589 1 88551517 to 88562166 10649 + lincRNA gene predicted gene, 19589
Tssr7974 1 88551525 to 88551547 22 + TSS region transcription start site region 7974
Tssr12879 1 88554844 to 88554851 7 - TSS region transcription start site region 12879
Tssr12880 1 88559306 to 88559325 19 - TSS region transcription start site region 12880
Tssr12881 1 88559345 to 88559348 3 - TSS region transcription start site region 12881
Tssr7975 1 88559901 to 88559923 22 + TSS region transcription start site region 7975
Gm41912 1 88566706 to 88569974 3268 - lncRNA gene predicted gene, 41912
D1Mit48 1 88568240 to 88568379 139 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 48
Tssr12882 1 88576597 to 88576609 12 - TSS region transcription start site region 12882
Tssr12883 1 88584648 to 88584661 13 - TSS region transcription start site region 12883
Tssr12884 1 88584783 to 88584790 7 - TSS region transcription start site region 12884
Gm38130 1 88653085 to 88654845 1760 + unclassified gene predicted gene, 38130
Tssr12885 1 88654709 to 88654714 5 - TSS region transcription start site region 12885
Gm29336 1 88656308 to 88658100 1792 + lincRNA gene predicted gene 29336
Arl4c 1 88698225 to 88702191 3966 - protein coding gene ADP-ribosylation factor-like 4C
Tssr12886 1 88698685 to 88698715 30 - TSS region transcription start site region 12886
Tssr12887 1 88699300 to 88699332 32 - TSS region transcription start site region 12887