Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:88399871-88610066

27 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cia15	1	65849847 to 88568379	22718532		QTL	collagen induced arthritis QTL 15
Tssr7967	1	88406939 to 88406950	11	+	TSS region	transcription start site region 7967
Tssr7968	1	88406956 to 88406965	9	+	TSS region	transcription start site region 7968
Spp2	1	88406961 to 88426438	19477	+	protein coding gene	secreted phosphoprotein 2
Tssr7969	1	88406971 to 88406974	3	+	TSS region	transcription start site region 7969
Tssr7970	1	88407002 to 88407101	99	+	TSS region	transcription start site region 7970
Gm29538	1	88443969 to 88462608	18639	-	lincRNA gene	predicted gene 29538
D1Mit486	1	88449551 to 88449748	197		DNA segment	DNA Segment, Chr 1 Massachusetts Institute of Technology 486
Tssr7971	1	88453377 to 88453402	25	+	TSS region	transcription start site region 7971
Gm28888	1	88459683 to 88465558	5875	+	lincRNA gene	predicted gene 28888
Tssr12876	1	88462566 to 88462595	29	-	TSS region	transcription start site region 12876
Tssr12877	1	88462612 to 88462624	12	-	TSS region	transcription start site region 12877
Tssr7972	1	88472384 to 88472388	4	+	TSS region	transcription start site region 7972
Tssr7973	1	88472402 to 88472412	10	+	TSS region	transcription start site region 7973
Glrp1	1	88499871 to 88510066	10195	-	protein coding gene	glutamine repeat protein 1
Tssr12878	1	88509895 to 88509934	39	-	TSS region	transcription start site region 12878
Gm19589	1	88551517 to 88562166	10649	+	lincRNA gene	predicted gene, 19589
Tssr7974	1	88551525 to 88551547	22	+	TSS region	transcription start site region 7974
Tssr12879	1	88554844 to 88554851	7	-	TSS region	transcription start site region 12879
Tssr12880	1	88559306 to 88559325	19	-	TSS region	transcription start site region 12880
Tssr12881	1	88559345 to 88559348	3	-	TSS region	transcription start site region 12881
Tssr7975	1	88559901 to 88559923	22	+	TSS region	transcription start site region 7975
Gm41912	1	88566706 to 88569974	3268	-	lncRNA gene	predicted gene, 41912
D1Mit48	1	88568240 to 88568379	139		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 48
Tssr12882	1	88576597 to 88576609	12	-	TSS region	transcription start site region 12882
Tssr12883	1	88584648 to 88584661	13	-	TSS region	transcription start site region 12883
Tssr12884	1	88584783 to 88584790	7	-	TSS region	transcription start site region 12884