Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:88236712-88458853

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mroh2a 1 88226991 to 88262289 35298 + protein coding gene maestro heat-like repeat family member 2A
Cpgi537 1 88241318 to 88241628 310 CpG island CpG island 537
Cpgi538 1 88252894 to 88253601 707 CpG island CpG island 538
Cpgi539 1 88254863 to 88255051 188 CpG island CpG island 539
Tssr7958 1 88259110 to 88259125 15 + TSS region transcription start site region 7958
Tssr7959 1 88259132 to 88259145 13 + TSS region transcription start site region 7959
Tssr7960 1 88259147 to 88259168 21 + TSS region transcription start site region 7960
Tssr7961 1 88259194 to 88259197 3 + TSS region transcription start site region 7961
Tssr7962 1 88259348 to 88259357 9 + TSS region transcription start site region 7962
Tssr7963 1 88259376 to 88259387 11 + TSS region transcription start site region 7963
Tssr7964 1 88259391 to 88259414 23 + TSS region transcription start site region 7964
Tssr7965 1 88259427 to 88259438 11 + TSS region transcription start site region 7965
Hjurp 1 88262471 to 88277633 15162 - protein coding gene Holliday junction recognition protein
Tssr12870 1 88264818 to 88264865 47 - TSS region transcription start site region 12870
Tssr12871 1 88274133 to 88274139 6 - TSS region transcription start site region 12871
Tssr12872 1 88274181 to 88274184 3 - TSS region transcription start site region 12872
Cpgi540 1 88276880 to 88278100 1220 CpG island CpG island 540
Tssr12873 1 88277264 to 88277294 30 - TSS region transcription start site region 12873
Tssr12874 1 88277470 to 88277509 39 - TSS region transcription start site region 12874
Tssr12875 1 88277510 to 88277636 126 - TSS region transcription start site region 12875
Cpgi541 1 88278147 to 88278579 432 CpG island CpG island 541
Cpgi542 1 88286352 to 88287251 899 CpG island CpG island 542
Trpm8 1 88306712 to 88388853 82141 + protein coding gene transient receptor potential cation channel, subfamily M, member 8
Tssr7966 1 88306731 to 88306737 6 + TSS region transcription start site region 7966
4930453O03Rik 1 88347489 to 88352930 5441 - antisense lncRNA gene RIKEN cDNA 4930453O03 gene
Tssr7967 1 88406939 to 88406950 11 + TSS region transcription start site region 7967
Tssr7968 1 88406956 to 88406965 9 + TSS region transcription start site region 7968
Spp2 1 88406961 to 88426438 19477 + protein coding gene secreted phosphoprotein 2
Tssr7969 1 88406971 to 88406974 3 + TSS region transcription start site region 7969
Tssr7970 1 88407002 to 88407101 99 + TSS region transcription start site region 7970
Gm29538 1 88443969 to 88462608 18639 - lincRNA gene predicted gene 29538
D1Mit486 1 88449551 to 88449748 197 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 486
Tssr7971 1 88453377 to 88453402 25 + TSS region transcription start site region 7971