Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:87938028-88078638

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dgkd 1 87853287 to 87945180 91893 + protein coding gene diacylglycerol kinase, delta
Usp40 1 87945119 to 88008551 63432 - protein coding gene ubiquitin specific peptidase 40
Cpgi535 1 88008028 to 88008638 610 CpG island CpG island 535
Tssr12866 1 88008520 to 88008556 36 - TSS region transcription start site region 12866
Gm25198 1 88015924 to 88016033 109 + miRNA gene predicted gene, 25198
Gm5832 1 88022381 to 88023962 1581 + pseudogene predicted gene 5832
Tssr7921 1 88025141 to 88025158 17 + TSS region transcription start site region 7921
Gm15375 1 88025211 to 88026059 848 + pseudogene predicted gene 15375
Tssr7922 1 88055377 to 88055449 72 + TSS region transcription start site region 7922
Ugt1a10 1 88055388 to 88219004 163616 + protein coding gene UDP glycosyltransferase 1 family, polypeptide A10
Gm20528 1 88055393 to 88218584 163191 - unclassified non-coding RNA gene predicted gene 20528
Gm38421 1 88055411 to 88056340 929 + pseudogene predicted gene, 38421
Tssr7923 1 88055455 to 88055466 11 + TSS region transcription start site region 7923
Tssr7924 1 88055467 to 88055478 11 + TSS region transcription start site region 7924
Tssr7925 1 88055490 to 88055495 5 + TSS region transcription start site region 7925
Tssr7926 1 88055514 to 88055519 5 + TSS region transcription start site region 7926
Tssr7927 1 88070727 to 88070746 19 + TSS region transcription start site region 7927
Tssr7928 1 88070753 to 88070760 7 + TSS region transcription start site region 7928
Tssr7929 1 88070765 to 88070797 32 + TSS region transcription start site region 7929
Ugt1a9 1 88070800 to 88218997 148197 + protein coding gene UDP glucuronosyltransferase 1 family, polypeptide A9
Tssr7930 1 88070804 to 88070813 9 + TSS region transcription start site region 7930
Tssr7931 1 88073749 to 88073796 47 + TSS region transcription start site region 7931