Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Cia15 | 1 | 22718532 | QTL | collagen induced arthritis QTL 15 | ||
Gm38609 | 1 | 8412 | - | lncRNA gene | predicted gene, 38609 | |
Cpgi534 | 1 | 1286 | CpG island | CpG island 534 | ||
Tssr12864 | 1 | 14 | - | TSS region | transcription start site region 12864 | |
Tssr7904 | 1 | 42 | + | TSS region | transcription start site region 7904 | |
Dgkd | 1 | 91893 | + | protein coding gene | diacylglycerol kinase, delta | |
Tssr7905 | 1 | 5 | + | TSS region | transcription start site region 7905 | |
Tssr7906 | 1 | 5 | + | TSS region | transcription start site region 7906 | |
Gm19582 | 1 | 952 | - | antisense lncRNA gene | predicted gene, 19582 | |
Tssr12865 | 1 | 13 | - | TSS region | transcription start site region 12865 | |
Tssr7907 | 1 | 14 | + | TSS region | transcription start site region 7907 | |
4833421G17Rik | 1 | 843 | + | unclassified gene | RIKEN cDNA 4833421G17 gene | |
Tssr7908 | 1 | 5 | + | TSS region | transcription start site region 7908 | |
Tssr7909 | 1 | 15 | + | TSS region | transcription start site region 7909 | |
Tssr7910 | 1 | 21 | + | TSS region | transcription start site region 7910 | |
Tssr7911 | 1 | 13 | + | TSS region | transcription start site region 7911 | |
Tssr7912 | 1 | 9 | + | TSS region | transcription start site region 7912 | |
Tssr7913 | 1 | 6 | + | TSS region | transcription start site region 7913 | |
Tssr7914 | 1 | 12 | + | TSS region | transcription start site region 7914 | |
Tssr7915 | 1 | 4 | + | TSS region | transcription start site region 7915 | |
Gm38365 | 1 | 2992 | + | unclassified gene | predicted gene, 38365 | |
Tssr7916 | 1 | 23 | + | TSS region | transcription start site region 7916 | |
Tssr7917 | 1 | 11 | + | TSS region | transcription start site region 7917 | |
Tssr7918 | 1 | 20 | + | TSS region | transcription start site region 7918 | |
Tssr152 | 1 | 19 | + | TSS region | transcription start site region 152 | |
Tssr7919 | 1 | 15 | + | TSS region | transcription start site region 7919 | |
Tssr7920 | 1 | 38 | + | TSS region | transcription start site region 7920 | |
Usp40 | 1 | 63432 | - | protein coding gene | ubiquitin specific peptidase 40 | |
Cpgi535 | 1 | 610 | CpG island | CpG island 535 | ||
Tssr12866 | 1 | 36 | - | TSS region | transcription start site region 12866 | |
Gm25198 | 1 | 109 | + | miRNA gene | predicted gene, 25198 | |
Gm5832 | 1 | 1581 | + | pseudogene | predicted gene 5832 | |
Tssr7921 | 1 | 17 | + | TSS region | transcription start site region 7921 | |
Gm15375 | 1 | 848 | + | pseudogene | predicted gene 15375 | |
Tssr7922 | 1 | 72 | + | TSS region | transcription start site region 7922 | |
Ugt1a10 | 1 | 163616 | + | protein coding gene | UDP glycosyltransferase 1 family, polypeptide A10 | |
Gm20528 | 1 | 163191 | - | unclassified non-coding RNA gene | predicted gene 20528 | |
Gm38421 | 1 | 929 | + | pseudogene | predicted gene, 38421 | |
Tssr7923 | 1 | 11 | + | TSS region | transcription start site region 7923 | |
Tssr7924 | 1 | 11 | + | TSS region | transcription start site region 7924 | |
Tssr7925 | 1 | 5 | + | TSS region | transcription start site region 7925 | |
Tssr7926 | 1 | 5 | + | TSS region | transcription start site region 7926 | |
Tssr7927 | 1 | 19 | + | TSS region | transcription start site region 7927 | |
Tssr7928 | 1 | 7 | + | TSS region | transcription start site region 7928 | |
Tssr7929 | 1 | 32 | + | TSS region | transcription start site region 7929 | |
Ugt1a9 | 1 | 148197 | + | protein coding gene | UDP glucuronosyltransferase 1 family, polypeptide A9 | |
Tssr7930 | 1 | 9 | + | TSS region | transcription start site region 7930 | |
Tssr7931 | 1 | 47 | + | TSS region | transcription start site region 7931 | |
Tssr7932 | 1 | 46 | + | TSS region | transcription start site region 7932 | |
Ugt1a8 | 1 | 131191 | + | protein coding gene | UDP glucuronosyltransferase 1 family, polypeptide A8 | |
Tssr7933 | 1 | 15 | + | TSS region | transcription start site region 7933 | |
Tssr7934 | 1 | 10 | + | TSS region | transcription start site region 7934 | |
Tssr7935 | 1 | 7 | + | TSS region | transcription start site region 7935 | |
Tssr7936 | 1 | 34 | + | TSS region | transcription start site region 7936 | |
Ugt1a7c | 1 | 124940 | + | protein coding gene | UDP glucuronosyltransferase 1 family, polypeptide A7C | |
Tssr7937 | 1 | 26 | + | TSS region | transcription start site region 7937 | |
Tssr7938 | 1 | 5 | + | TSS region | transcription start site region 7938 | |
Tssr7939 | 1 | 14 | + | TSS region | transcription start site region 7939 | |
Gm15373 | 1 | 213 | + | pseudogene | predicted gene 15373 | |
Tssr7940 | 1 | 20 | + | TSS region | transcription start site region 7940 | |
Ugt1a6b | 1 | 115741 | + | protein coding gene | UDP glucuronosyltransferase 1 family, polypeptide A6B | |
Tssr7941 | 1 | 6 | + | TSS region | transcription start site region 7941 | |
Gm15372 | 1 | 833 | + | pseudogene | predicted gene 15372 | |
Gm15370 | 1 | 252 | + | pseudogene | predicted gene 15370 | |
Tssr7942 | 1 | 20 | + | TSS region | transcription start site region 7942 | |
Ugt1a6a | 1 | 84188 | + | protein coding gene | UDP glucuronosyltransferase 1 family, polypeptide A6A | |
Tssr7943 | 1 | 7 | + | TSS region | transcription start site region 7943 | |
Gm15369 | 1 | 393 | + | pseudogene | predicted gene 15369 | |
Gm15374 | 1 | 843 | + | pseudogene | predicted gene 15374 | |
Gm15371 | 1 | 783 | + | pseudogene | predicted gene 15371 | |
Tssr7944 | 1 | 7 | + | TSS region | transcription start site region 7944 | |
Tssr7945 | 1 | 33 | + | TSS region | transcription start site region 7945 | |
Ugt1a5 | 1 | 52985 | + | protein coding gene | UDP glucuronosyltransferase 1 family, polypeptide A5 | |
Tssr7946 | 1 | 16 | + | TSS region | transcription start site region 7946 | |
Tssr7947 | 1 | 3 | + | TSS region | transcription start site region 7947 | |
Tssr7948 | 1 | 17 | + | TSS region | transcription start site region 7948 | |
Tssr7949 | 1 | 11 | + | TSS region | transcription start site region 7949 | |
Gm15368 | 1 | 848 | + | pseudogene | predicted gene 15368 | |
Gm15376 | 1 | 782 | + | pseudogene | predicted gene 15376 | |
Ugt1a2 | 1 | 18396 | + | protein coding gene | UDP glucuronosyltransferase 1 family, polypeptide A2 | |
Tssr7950 | 1 | 26 | + | TSS region | transcription start site region 7950 | |
Dnajb3 | 1 | 1016 | - | protein coding gene | DnaJ heat shock protein family (Hsp40) member B3 | |
Cpgi536 | 1 | 899 | CpG island | CpG island 536 | ||
Tssr12867 | 1 | 72 | - | TSS region | transcription start site region 12867 | |
Tssr12868 | 1 | 20 | - | TSS region | transcription start site region 12868 | |
Tssr7951 | 1 | 11 | + | TSS region | transcription start site region 7951 | |
Tssr7952 | 1 | 29 | + | TSS region | transcription start site region 7952 | |
Ugt1a1 | 1 | 7038 | + | protein coding gene | UDP glucuronosyltransferase 1 family, polypeptide A1 | |
Tssr7953 | 1 | 21 | + | TSS region | transcription start site region 7953 | |
Tssr7954 | 1 | 18 | + | TSS region | transcription start site region 7954 | |
Tssr12869 | 1 | 14 | - | TSS region | transcription start site region 12869 | |
Tssr7955 | 1 | 28 | + | TSS region | transcription start site region 7955 | |
Mroh2a | 1 | 35298 | + | protein coding gene | maestro heat-like repeat family member 2A | |
Tssr7956 | 1 | 59 | + | TSS region | transcription start site region 7956 | |
Tssr7957 | 1 | 1 | + | TSS region | transcription start site region 7957 | |
Cpgi537 | 1 | 310 | CpG island | CpG island 537 | ||
Cpgi538 | 1 | 707 | CpG island | CpG island 538 | ||
Cpgi539 | 1 | 188 | CpG island | CpG island 539 | ||
Tssr7958 | 1 | 15 | + | TSS region | transcription start site region 7958 | |
Tssr7959 | 1 | 13 | + | TSS region | transcription start site region 7959 | |
Tssr7960 | 1 | 21 | + | TSS region | transcription start site region 7960 | |
Tssr7961 | 1 | 3 | + | TSS region | transcription start site region 7961 | |
Tssr7962 | 1 | 9 | + | TSS region | transcription start site region 7962 | |
Tssr7963 | 1 | 11 | + | TSS region | transcription start site region 7963 | |
Tssr7964 | 1 | 23 | + | TSS region | transcription start site region 7964 | |
Tssr7965 | 1 | 11 | + | TSS region | transcription start site region 7965 | |
Hjurp | 1 | 15162 | - | protein coding gene | Holliday junction recognition protein | |
Tssr12870 | 1 | 47 | - | TSS region | transcription start site region 12870 | |
Tssr12871 | 1 | 6 | - | TSS region | transcription start site region 12871 | |
Tssr12872 | 1 | 3 | - | TSS region | transcription start site region 12872 | |
Cpgi540 | 1 | 1220 | CpG island | CpG island 540 | ||
Tssr12873 | 1 | 30 | - | TSS region | transcription start site region 12873 | |
Tssr12874 | 1 | 39 | - | TSS region | transcription start site region 12874 | |
Tssr12875 | 1 | 126 | - | TSS region | transcription start site region 12875 | |
Cpgi541 | 1 | 432 | CpG island | CpG island 541 | ||
Cpgi542 | 1 | 899 | CpG island | CpG island 542 | ||
Trpm8 | 1 | 82141 | + | protein coding gene | transient receptor potential cation channel, subfamily M, member 8 | |
Tssr7966 | 1 | 6 | + | TSS region | transcription start site region 7966 | |
4930453O03Rik | 1 | 5441 | - | antisense lncRNA gene | RIKEN cDNA 4930453O03 gene | |
Tssr7967 | 1 | 11 | + | TSS region | transcription start site region 7967 | |
Tssr7968 | 1 | 9 | + | TSS region | transcription start site region 7968 | |
Spp2 | 1 | 19477 | + | protein coding gene | secreted phosphoprotein 2 | |
Tssr7969 | 1 | 3 | + | TSS region | transcription start site region 7969 | |
Tssr7970 | 1 | 99 | + | TSS region | transcription start site region 7970 | |
Gm29538 | 1 | 18639 | - | lincRNA gene | predicted gene 29538 | |
D1Mit486 | 1 | 197 | DNA segment | DNA Segment, Chr 1 Massachusetts Institute of Technology 486 | ||
Tssr7971 | 1 | 25 | + | TSS region | transcription start site region 7971 | |
Gm28888 | 1 | 5875 | + | lincRNA gene | predicted gene 28888 | |
Tssr12876 | 1 | 29 | - | TSS region | transcription start site region 12876 | |
Tssr12877 | 1 | 12 | - | TSS region | transcription start site region 12877 | |
Tssr7972 | 1 | 4 | + | TSS region | transcription start site region 7972 | |
Tssr7973 | 1 | 10 | + | TSS region | transcription start site region 7973 | |
Glrp1 | 1 | 10195 | - | protein coding gene | glutamine repeat protein 1 | |
Tssr12878 | 1 | 39 | - | TSS region | transcription start site region 12878 | |
Gm19589 | 1 | 10649 | + | lincRNA gene | predicted gene, 19589 | |
Tssr7974 | 1 | 22 | + | TSS region | transcription start site region 7974 | |
Tssr12879 | 1 | 7 | - | TSS region | transcription start site region 12879 | |
Tssr12880 | 1 | 19 | - | TSS region | transcription start site region 12880 | |
Tssr12881 | 1 | 3 | - | TSS region | transcription start site region 12881 | |
Tssr7975 | 1 | 22 | + | TSS region | transcription start site region 7975 | |
Gm41912 | 1 | 3268 | - | lncRNA gene | predicted gene, 41912 | |
D1Mit48 | 1 | 139 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 48 | ||
Tssr12882 | 1 | 12 | - | TSS region | transcription start site region 12882 | |
Tssr12883 | 1 | 13 | - | TSS region | transcription start site region 12883 | |
Tssr12884 | 1 | 7 | - | TSS region | transcription start site region 12884 | |
Gm38130 | 1 | 1760 | + | unclassified gene | predicted gene, 38130 | |
Tssr12885 | 1 | 5 | - | TSS region | transcription start site region 12885 | |
Gm29336 | 1 | 1792 | + | lincRNA gene | predicted gene 29336 | |
Arl4c | 1 | 3966 | - | protein coding gene | ADP-ribosylation factor-like 4C | |
Tssr12886 | 1 | 30 | - | TSS region | transcription start site region 12886 | |
Tssr12887 | 1 | 32 | - | TSS region | transcription start site region 12887 | |
Tssr12888 | 1 | 17 | - | TSS region | transcription start site region 12888 | |
Cpgi543 | 1 | 2001 | CpG island | CpG island 543 | ||
Tssr12889 | 1 | 21 | - | TSS region | transcription start site region 12889 | |
Tssr12890 | 1 | 18 | - | TSS region | transcription start site region 12890 | |
Tssr12891 | 1 | 11 | - | TSS region | transcription start site region 12891 | |
Tssr12892 | 1 | 11 | - | TSS region | transcription start site region 12892 | |
Tssr12893 | 1 | 59 | - | TSS region | transcription start site region 12893 | |
Tssr7976 | 1 | 21 | + | TSS region | transcription start site region 7976 | |
Tssr12894 | 1 | 16 | - | TSS region | transcription start site region 12894 | |
Cpgi544 | 1 | 288 | CpG island | CpG island 544 | ||
Gm29335 | 1 | 458 | - | pseudogene | predicted gene 29335 | |
D1Mit305 | 1 | 144 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 305 | ||
Platr5 | 1 | 843 | + | lincRNA gene | pluripotency associated transcript 5 | |
Tssr7977 | 1 | 11 | + | TSS region | transcription start site region 7977 | |
Tssr12895 | 1 | 5 | - | TSS region | transcription start site region 12895 | |
D1Mit440 | 1 | 120 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology 440 | ||
Gm29337 | 1 | 6935 | - | lincRNA gene | predicted gene 29337 | |
Gm4753 | 1 | 1254 | + | pseudogene | predicted gene 4753 | |
Tssr153 | 1 | 3 | + | TSS region | transcription start site region 153 | |
Gm34194 | 1 | 39881 | - | lncRNA gene | predicted gene, 34194 | |
Tssr7978 | 1 | 5 | + | TSS region | transcription start site region 7978 | |
Tssr7979 | 1 | 20 | + | TSS region | transcription start site region 7979 | |
Tssr7980 | 1 | 27 | + | TSS region | transcription start site region 7980 | |
1700067G17Rik | 1 | 6097 | + | lincRNA gene | RIKEN cDNA 1700067G17 gene | |
Tssr7981 | 1 | 12 | + | TSS region | transcription start site region 7981 | |
Gm18699 | 1 | 242 | + | pseudogene | predicted gene, 18699 | |
Cpgi545 | 1 | 1391 | CpG island | CpG island 545 | ||
Tssr12896 | 1 | 9 | - | TSS region | transcription start site region 12896 | |
Tssr7982 | 1 | 7 | + | TSS region | transcription start site region 7982 | |
Tssr7983 | 1 | 15 | + | TSS region | transcription start site region 7983 | |
Tssr7984 | 1 | 18 | + | TSS region | transcription start site region 7984 | |
Sh3bp4 | 1 | 84606 | + | protein coding gene | SH3-domain binding protein 4 | |
Tssr7985 | 1 | 14 | + | TSS region | transcription start site region 7985 | |
Gm38312 | 1 | 1745 | + | unclassified gene | predicted gene, 38312 | |
Gm34331 | 1 | 1515 | - | lncRNA gene | predicted gene, 34331 | |
Tssr12897 | 1 | 19 | - | TSS region | transcription start site region 12897 | |
Tssr7986 | 1 | 15 | + | TSS region | transcription start site region 7986 | |
Tssr7987 | 1 | 5 | + | TSS region | transcription start site region 7987 | |
5730492I20Rik | 1 | 1389 | unclassified non-coding RNA gene | RIKEN cDNA 5730492I20 gene | ||
D1Mit487 | 1 | 136 | DNA segment | DNA Segment, Chr 1 Massachusetts Institute of Technology 487 | ||
Tssr7988 | 1 | 5 | + | TSS region | transcription start site region 7988 | |
Gm5259 | 1 | 799 | - | pseudogene | predicted gene 5259 |