Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:87768342-87858351

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atg16l1 1 87756006 to 87792428 36422 + protein coding gene autophagy related 16-like 1 (S. cerevisiae)
Tssr7893 1 87776936 to 87776941 5 + TSS region transcription start site region 7893
Gm25395 1 87776938 to 87777209 271 + snoRNA gene predicted gene, 25395
Scarna6 1 87784571 to 87784818 247 + snoRNA gene small Cajal body-specific RNA 6
Tssr7894 1 87803638 to 87803662 24 + TSS region transcription start site region 7894
Sag 1 87803680 to 87845158 41478 + protein coding gene S-antigen, retina and pineal gland (arrestin)
Tssr7895 1 87803863 to 87803880 17 + TSS region transcription start site region 7895
Tssr7896 1 87803897 to 87803906 9 + TSS region transcription start site region 7896
Tssr7897 1 87803915 to 87803929 14 + TSS region transcription start site region 7897
Tssr7898 1 87803933 to 87803945 12 + TSS region transcription start site region 7898
Tssr7899 1 87813342 to 87813351 9 + TSS region transcription start site region 7899
Tssr7900 1 87814796 to 87814808 12 + TSS region transcription start site region 7900
Tssr7901 1 87828289 to 87828292 3 + TSS region transcription start site region 7901
Tssr7902 1 87828567 to 87828593 26 + TSS region transcription start site region 7902
Tssr7903 1 87835530 to 87835535 5 + TSS region transcription start site region 7903
Gm38609 1 87844857 to 87853269 8412 - lncRNA gene predicted gene, 38609
Cpgi534 1 87852990 to 87854276 1286 CpG island CpG island 534
Tssr12864 1 87853153 to 87853167 14 - TSS region transcription start site region 12864
Tssr7904 1 87853264 to 87853306 42 + TSS region transcription start site region 7904
Dgkd 1 87853287 to 87945180 91893 + protein coding gene diacylglycerol kinase, delta
Tssr7905 1 87853327 to 87853332 5 + TSS region transcription start site region 7905
Tssr7906 1 87853338 to 87853343 5 + TSS region transcription start site region 7906
Gm19582 1 87853347 to 87854299 952 - antisense lncRNA gene predicted gene, 19582
Tssr12865 1 87854246 to 87854259 13 - TSS region transcription start site region 12865