Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:87493825-87653871

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ngef 1 87476834 to 87573870 97036 - protein coding gene neuronal guanine nucleotide exchange factor
Cpgi530 1 87509215 to 87510880 1665 CpG island CpG island 530
Tssr12854 1 87510283 to 87510294 11 - TSS region transcription start site region 12854
Tssr12855 1 87510306 to 87510373 67 - TSS region transcription start site region 12855
Tssr12856 1 87510548 to 87510584 36 - TSS region transcription start site region 12856
Gm17181 1 87514175 to 87514297 122 + pseudogene predicted gene 17181
Gm6153 1 87543635 to 87544692 1057 - pseudogene predicted gene 6153
Gm46099 1 87550490 to 87568319 17829 + lncRNA gene predicted gene, 46099
Tssr7854 1 87551262 to 87551268 6 + TSS region transcription start site region 7854
Tssr12857 1 87573825 to 87573871 46 - TSS region transcription start site region 12857
Tssr12858 1 87573905 to 87573934 29 - TSS region transcription start site region 12858
Tssr7855 1 87574016 to 87574032 16 + TSS region transcription start site region 7855
Neu2 1 87574027 to 87597845 23818 + protein coding gene neuraminidase 2
Tssr7856 1 87588781 to 87588786 5 + TSS region transcription start site region 7856
Tssr7857 1 87594545 to 87594556 11 + TSS region transcription start site region 7857
Tssr7858 1 87594583 to 87594597 14 + TSS region transcription start site region 7858
Tssr7859 1 87607809 to 87607822 13 + TSS region transcription start site region 7859
Cpgi531 1 87607838 to 87608053 215 CpG island CpG island 531
Tssr7860 1 87620306 to 87620323 17 + TSS region transcription start site region 7860
Inpp5d 1 87620312 to 87720507 100195 + protein coding gene inositol polyphosphate-5-phosphatase D
Tssr7861 1 87620334 to 87620401 67 + TSS region transcription start site region 7861
Tssr7862 1 87620431 to 87620438 7 + TSS region transcription start site region 7862
Tssr151 1 87620455 to 87620463 8 + TSS region transcription start site region 151
Cpgi532 1 87620512 to 87620687 175 CpG island CpG island 532
Tssr12859 1 87621518 to 87621540 22 - TSS region transcription start site region 12859
Tssr7863 1 87625511 to 87625531 20 + TSS region transcription start site region 7863
Tssr12860 1 87626434 to 87626464 30 - TSS region transcription start site region 12860
Tssr7864 1 87626680 to 87626690 10 + TSS region transcription start site region 7864
Tssr7865 1 87635962 to 87635978 16 + TSS region transcription start site region 7865
Tssr7866 1 87637125 to 87637130 5 + TSS region transcription start site region 7866
Tssr7867 1 87637507 to 87637512 5 + TSS region transcription start site region 7867
Tssr7868 1 87640699 to 87640748 49 + TSS region transcription start site region 7868
Tssr7869 1 87641175 to 87641178 3 + TSS region transcription start site region 7869
Tssr7870 1 87646610 to 87646645 35 + TSS region transcription start site region 7870
Tssr12861 1 87650649 to 87650675 26 - TSS region transcription start site region 12861
Tssr7871 1 87653313 to 87653326 13 + TSS region transcription start site region 7871
Tssr7872 1 87653331 to 87653342 11 + TSS region transcription start site region 7872