MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:87478635-87609692

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ngef	1	87476834 to 87573870	97036	-	protein coding gene	neuronal guanine nucleotide exchange factor
Cpgi530	1	87509215 to 87510880	1665		CpG island	CpG island 530
Tssr12854	1	87510283 to 87510294	11	-	TSS region	transcription start site region 12854
Tssr12855	1	87510306 to 87510373	67	-	TSS region	transcription start site region 12855
Tssr12856	1	87510548 to 87510584	36	-	TSS region	transcription start site region 12856
Gm17181	1	87514175 to 87514297	122	+	pseudogene	predicted gene 17181
Gm6153	1	87543635 to 87544692	1057	-	pseudogene	predicted gene 6153
Gm46099	1	87550490 to 87568319	17829	+	lncRNA gene	predicted gene, 46099
Tssr7854	1	87551262 to 87551268	6	+	TSS region	transcription start site region 7854
Tssr12857	1	87573825 to 87573871	46	-	TSS region	transcription start site region 12857
Tssr12858	1	87573905 to 87573934	29	-	TSS region	transcription start site region 12858
Tssr7855	1	87574016 to 87574032	16	+	TSS region	transcription start site region 7855
Neu2	1	87574027 to 87597845	23818	+	protein coding gene	neuraminidase 2
Tssr7856	1	87588781 to 87588786	5	+	TSS region	transcription start site region 7856
Tssr7857	1	87594545 to 87594556	11	+	TSS region	transcription start site region 7857
Tssr7858	1	87594583 to 87594597	14	+	TSS region	transcription start site region 7858
Tssr7859	1	87607809 to 87607822	13	+	TSS region	transcription start site region 7859
Cpgi531	1	87607838 to 87608053	215		CpG island	CpG island 531