Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:87214363-87360839

25 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi525	1	87213566 to 87214626	1060		CpG island	CpG island 525
Eif4e2	1	87213914 to 87240488	26574	+	protein coding gene	eukaryotic translation initiation factor 4E member 2
Tssr7831	1	87214301 to 87214369	68	+	TSS region	transcription start site region 7831
Tssr7832	1	87214376 to 87214389	13	+	TSS region	transcription start site region 7832
Tssr12852	1	87219633 to 87219656	23	-	TSS region	transcription start site region 12852
Tssr7833	1	87225911 to 87225938	27	+	TSS region	transcription start site region 7833
Gm26187	1	87251148 to 87251248	100	+	snRNA gene	predicted gene, 26187
Cpgi526	1	87258498 to 87258746	248		CpG island	CpG island 526
Cpgi527	1	87263891 to 87265016	1125		CpG island	CpG island 527
Tssr7834	1	87264345 to 87264370	25	+	TSS region	transcription start site region 7834
Efhd1	1	87264363 to 87310839	46476	+	protein coding gene	EF hand domain containing 1
Tssr7835	1	87264413 to 87264444	31	+	TSS region	transcription start site region 7835
Efhd1os	1	87264481 to 87265174	693	-	antisense lncRNA gene	EF hand domain containing 1, opposite strand
Tssr7836	1	87264603 to 87264633	30	+	TSS region	transcription start site region 7836
Tssr7837	1	87281757 to 87281762	5	+	TSS region	transcription start site region 7837
Gm41911	1	87293832 to 87309496	15664	-	lncRNA gene	predicted gene, 41911
Cpgi528	1	87326620 to 87327746	1126		CpG island	CpG island 528
Tssr7838	1	87326997 to 87327006	9	+	TSS region	transcription start site region 7838
Gigyf2	1	87326998 to 87450796	123798	+	protein coding gene	GRB10 interacting GYF protein 2
Tssr7839	1	87327008 to 87327042	34	+	TSS region	transcription start site region 7839
Tssr7840	1	87327044 to 87327053	9	+	TSS region	transcription start site region 7840
Tssr7841	1	87336608 to 87336613	5	+	TSS region	transcription start site region 7841
Gm22549	1	87341455 to 87341561	106	-	snRNA gene	predicted gene, 22549
Tssr149	1	87358375 to 87358379	4	+	TSS region	transcription start site region 149
Tssr7842	1	87360277 to 87360280	3	+	TSS region	transcription start site region 7842