Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:87077236-87127252

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm29371 1 87080171 to 87096418 16247 + lincRNA gene predicted gene 29371
Alppl2 1 87086694 to 87089928 3234 - protein coding gene alkaline phosphatase, placental-like 2
Cpgi516 1 87087055 to 87087505 450 CpG island CpG island 516
Alpi 1 87098002 to 87101606 3604 - protein coding gene alkaline phosphatase, intestinal
Tssr12817 1 87098098 to 87098116 18 - TSS region transcription start site region 12817
Tssr12818 1 87098539 to 87098558 19 - TSS region transcription start site region 12818
Tssr12819 1 87098559 to 87098599 40 - TSS region transcription start site region 12819
Cpgi517 1 87098597 to 87099086 489 CpG island CpG island 517
Tssr12820 1 87098801 to 87098811 10 - TSS region transcription start site region 12820
Tssr12821 1 87098877 to 87098904 27 - TSS region transcription start site region 12821
Tssr7779 1 87099076 to 87099100 24 + TSS region transcription start site region 7779
Tssr12822 1 87099135 to 87099144 9 - TSS region transcription start site region 12822
Tssr12823 1 87099419 to 87099428 9 - TSS region transcription start site region 12823
Tssr12824 1 87099445 to 87099454 9 - TSS region transcription start site region 12824
Tssr12825 1 87099525 to 87099535 10 - TSS region transcription start site region 12825
Tssr12826 1 87099549 to 87099561 12 - TSS region transcription start site region 12826
Tssr7780 1 87099700 to 87099721 21 + TSS region transcription start site region 7780
Tssr12827 1 87099734 to 87099747 13 - TSS region transcription start site region 12827
Tssr12828 1 87100181 to 87100192 11 - TSS region transcription start site region 12828
Tssr12829 1 87100316 to 87100354 38 - TSS region transcription start site region 12829
Tssr12830 1 87100562 to 87100571 9 - TSS region transcription start site region 12830
Tssr12831 1 87100579 to 87100592 13 - TSS region transcription start site region 12831
Tssr12832 1 87100598 to 87100612 14 - TSS region transcription start site region 12832
Tssr12833 1 87101561 to 87101566 5 - TSS region transcription start site region 12833
Tssr12834 1 87101590 to 87101617 27 - TSS region transcription start site region 12834
Tssr12835 1 87101630 to 87101636 6 - TSS region transcription start site region 12835
Tssr12836 1 87101715 to 87101719 4 - TSS region transcription start site region 12836
Tssr12837 1 87102236 to 87102252 16 - TSS region transcription start site region 12837
Gm29372 1 87116321 to 87117158 837 - pseudogene predicted gene 29372
Tssr7781 1 87124946 to 87124960 14 + TSS region transcription start site region 7781
Akp3 1 87125008 to 87127912 2904 + protein coding gene alkaline phosphatase 3, intestine, not Mn requiring
Tssr7782 1 87125396 to 87125403 7 + TSS region transcription start site region 7782
Tssr7783 1 87125688 to 87125696 8 + TSS region transcription start site region 7783
Tssr12838 1 87125718 to 87125730 12 - TSS region transcription start site region 12838
Tssr12839 1 87125733 to 87125740 7 - TSS region transcription start site region 12839
Tssr12840 1 87125746 to 87125749 3 - TSS region transcription start site region 12840
Tssr7784 1 87125931 to 87125938 7 + TSS region transcription start site region 7784
Tssr7785 1 87125967 to 87125977 10 + TSS region transcription start site region 7785
Tssr7786 1 87125997 to 87126004 7 + TSS region transcription start site region 7786
Tssr7787 1 87126323 to 87126333 10 + TSS region transcription start site region 7787
Tssr145 1 87126344 to 87126352 8 + TSS region transcription start site region 145
Tssr7788 1 87126725 to 87126731 6 + TSS region transcription start site region 7788
Tssr7789 1 87126755 to 87126765 10 + TSS region transcription start site region 7789
Tssr12841 1 87126798 to 87126808 10 - TSS region transcription start site region 12841
Tssr7790 1 87126809 to 87126818 9 + TSS region transcription start site region 7790
Tssr7791 1 87126933 to 87126945 12 + TSS region transcription start site region 7791
Tssr7792 1 87126961 to 87126971 10 + TSS region transcription start site region 7792
Tssr7793 1 87126974 to 87126982 8 + TSS region transcription start site region 7793
Tssr7794 1 87126991 to 87126995 4 + TSS region transcription start site region 7794
Tssr7795 1 87127017 to 87127027 10 + TSS region transcription start site region 7795
Tssr7796 1 87127040 to 87127050 10 + TSS region transcription start site region 7796
Tssr7797 1 87127057 to 87127063 6 + TSS region transcription start site region 7797
Tssr7798 1 87127094 to 87127101 7 + TSS region transcription start site region 7798
Cpgi518 1 87127110 to 87127957 847 CpG island CpG island 518
Tssr12842 1 87127124 to 87127128 4 - TSS region transcription start site region 12842