Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:86663573-87125132

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nppc 1 86666293 to 86670573 4280 - protein coding gene natriuretic peptide type C
Tssr12814 1 86666689 to 86666694 5 - TSS region transcription start site region 12814
Cpgi514 1 86669474 to 86671029 1555 CpG island CpG island 514
Tssr12815 1 86670565 to 86670579 14 - TSS region transcription start site region 12815
Cpgi515 1 86703251 to 86704241 990 CpG island CpG island 515
Tssr7775 1 86703788 to 86703843 55 + TSS region transcription start site region 7775
Dis3l2 1 86703808 to 87050095 346287 + protein coding gene DIS3 like 3'-5' exoribonuclease 2
Gm29097 1 86764944 to 86765365 421 - pseudogene predicted gene 29097
Gm29055 1 86774819 to 86776528 1709 + sense intronic lncRNA gene predicted gene 29055
Tssr7776 1 86789261 to 86789265 4 + TSS region transcription start site region 7776
Gm37485 1 86801075 to 86804027 2952 + unclassified gene predicted gene, 37485
Gm38142 1 86826101 to 86829655 3554 + unclassified gene predicted gene, 38142
Gm38010 1 86834995 to 86837778 2783 + unclassified gene predicted gene, 38010
Gm37541 1 86874350 to 86876664 2314 + unclassified gene predicted gene, 37541
Gm38021 1 86893573 to 86895132 1559 + unclassified gene predicted gene, 38021
Gm6136 1 86908793 to 86909683 890 - pseudogene predicted pseudogene 6136
Tssr12816 1 86909703 to 86909707 4 - TSS region transcription start site region 12816
Gm37967 1 86917992 to 86920656 2664 + unclassified gene predicted gene, 37967
Gm41909 1 86922934 to 86930742 7808 - lncRNA gene predicted gene, 41909
Gm37017 1 86988270 to 86989016 746 + unclassified gene predicted gene, 37017
Tssr7777 1 87020504 to 87020508 4 + TSS region transcription start site region 7777
Gm37447 1 87036723 to 87039650 2927 + unclassified gene predicted gene, 37447
Gm28375 1 87056505 to 87067441 10936 - antisense lncRNA gene predicted gene 28375
Tssr7778 1 87068001 to 87068018 17 + TSS region transcription start site region 7778
Akp-ps1 1 87068030 to 87071005 2975 + pseudogene alkaline phosphatase pseudogene 1
Gm41910 1 87071419 to 87072091 672 + lncRNA gene predicted gene, 41910
Gm29371 1 87080171 to 87096418 16247 + lincRNA gene predicted gene 29371
Alppl2 1 87086694 to 87089928 3234 - protein coding gene alkaline phosphatase, placental-like 2
Cpgi516 1 87087055 to 87087505 450 CpG island CpG island 516
Alpi 1 87098002 to 87101606 3604 - protein coding gene alkaline phosphatase, intestinal
Tssr12817 1 87098098 to 87098116 18 - TSS region transcription start site region 12817
Tssr12818 1 87098539 to 87098558 19 - TSS region transcription start site region 12818
Tssr12819 1 87098559 to 87098599 40 - TSS region transcription start site region 12819
Cpgi517 1 87098597 to 87099086 489 CpG island CpG island 517
Tssr12820 1 87098801 to 87098811 10 - TSS region transcription start site region 12820
Tssr12821 1 87098877 to 87098904 27 - TSS region transcription start site region 12821
Tssr7779 1 87099076 to 87099100 24 + TSS region transcription start site region 7779
Tssr12822 1 87099135 to 87099144 9 - TSS region transcription start site region 12822
Tssr12823 1 87099419 to 87099428 9 - TSS region transcription start site region 12823
Tssr12824 1 87099445 to 87099454 9 - TSS region transcription start site region 12824
Tssr12825 1 87099525 to 87099535 10 - TSS region transcription start site region 12825
Tssr12826 1 87099549 to 87099561 12 - TSS region transcription start site region 12826
Tssr7780 1 87099700 to 87099721 21 + TSS region transcription start site region 7780
Tssr12827 1 87099734 to 87099747 13 - TSS region transcription start site region 12827
Tssr12828 1 87100181 to 87100192 11 - TSS region transcription start site region 12828
Tssr12829 1 87100316 to 87100354 38 - TSS region transcription start site region 12829
Tssr12830 1 87100562 to 87100571 9 - TSS region transcription start site region 12830
Tssr12831 1 87100579 to 87100592 13 - TSS region transcription start site region 12831
Tssr12832 1 87100598 to 87100612 14 - TSS region transcription start site region 12832
Tssr12833 1 87101561 to 87101566 5 - TSS region transcription start site region 12833
Tssr12834 1 87101590 to 87101617 27 - TSS region transcription start site region 12834
Tssr12835 1 87101630 to 87101636 6 - TSS region transcription start site region 12835
Tssr12836 1 87101715 to 87101719 4 - TSS region transcription start site region 12836
Tssr12837 1 87102236 to 87102252 16 - TSS region transcription start site region 12837
Gm29372 1 87116321 to 87117158 837 - pseudogene predicted gene 29372
Tssr7781 1 87124946 to 87124960 14 + TSS region transcription start site region 7781
Akp3 1 87125008 to 87127912 2904 + protein coding gene alkaline phosphatase 3, intestine, not Mn requiring