Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:86516958-86657659

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr7766 1 86522665 to 86522683 18 + TSS region transcription start site region 7766
Tssr7767 1 86522709 to 86522727 18 + TSS region transcription start site region 7767
Cpgi511 1 86524752 to 86528946 4194 CpG island CpG island 511
Tssr12809 1 86525276 to 86525310 34 - TSS region transcription start site region 12809
Tssr7768 1 86525490 to 86525525 35 + TSS region transcription start site region 7768
Tssr12810 1 86526205 to 86526247 42 - TSS region transcription start site region 12810
Tssr12811 1 86526548 to 86526559 11 - TSS region transcription start site region 12811
Tssr7769 1 86526688 to 86526722 34 + TSS region transcription start site region 7769
Ptma 1 86526736 to 86530698 3962 + protein coding gene prothymosin alpha
Tssr7770 1 86526789 to 86526806 17 + TSS region transcription start site region 7770
Tssr7771 1 86526823 to 86526859 36 + TSS region transcription start site region 7771
Tssr7772 1 86528862 to 86528873 11 + TSS region transcription start site region 7772
Pde6d 1 86542994 to 86582629 39635 - protein coding gene phosphodiesterase 6D, cGMP-specific, rod, delta
Gm37152 1 86580058 to 86581232 1174 + unclassified gene predicted gene, 37152
Cpgi512 1 86582046 to 86582861 815 CpG island CpG island 512
Tssr12812 1 86582500 to 86582565 65 - TSS region transcription start site region 12812
Tssr12813 1 86582776 to 86582790 14 - TSS region transcription start site region 12813
Cops7b 1 86582892 to 86606500 23608 + protein coding gene COP9 signalosome subunit 7B
Tssr7773 1 86582893 to 86582930 37 + TSS region transcription start site region 7773
Cpgi513 1 86586958 to 86587659 701 CpG island CpG island 513
Tssr7774 1 86587125 to 86587156 31 + TSS region transcription start site region 7774
Gm41908 1 86627068 to 86644243 17175 + lncRNA gene predicted gene, 41908
Gm22955 1 86637552 to 86637608 56 - miRNA gene predicted gene, 22955
Gm37022 1 86638201 to 86640454 2253 + unclassified gene predicted gene, 37022