Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:86358928-86468969

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ncl 1 86344719 to 86359400 14681 - protein coding gene nucleolin
Cpgi503 1 86358552 to 86360335 1783 CpG island CpG island 503
Tssr12788 1 86358970 to 86358997 27 - TSS region transcription start site region 12788
Tssr12789 1 86359018 to 86359046 28 - TSS region transcription start site region 12789
Tssr12790 1 86359358 to 86359381 23 - TSS region transcription start site region 12790
Tssr12791 1 86359481 to 86359486 5 - TSS region transcription start site region 12791
Tssr7749 1 86359553 to 86359590 37 + TSS region transcription start site region 7749
C130036L24Rik 1 86359574 to 86367964 8390 + lncRNA gene RIKEN cDNA C130036L24 gene
Tssr7750 1 86359638 to 86359692 54 + TSS region transcription start site region 7750
Tssr12792 1 86359951 to 86359966 15 - TSS region transcription start site region 12792
Gm45908 1 86377100 to 86378276 1176 - pseudogene predicted gene 45908
Nmur1 1 86386242 to 86389361 3119 - protein coding gene neuromedin U receptor 1
Cpgi504 1 86387561 to 86388021 460 CpG island CpG island 504
Tssr12793 1 86389369 to 86389429 60 - TSS region transcription start site region 12793
Tssr7751 1 86413928 to 86413969 41 + TSS region transcription start site region 7751
D1Mit415 1 86419252 to 86419406 154 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 415
Tssr7752 1 86424153 to 86424160 7 + TSS region transcription start site region 7752
Tssr7753 1 86424161 to 86424179 18 + TSS region transcription start site region 7753
Tssr12794 1 86426214 to 86426232 18 - TSS region transcription start site region 12794
Tssr7754 1 86426323 to 86426349 26 + TSS region transcription start site region 7754
Tex44 1 86426329 to 86428049 1720 + protein coding gene testis expressed 44
Cpgi505 1 86427744 to 86427907 163 CpG island CpG island 505
Gm32700 1 86430011 to 86441525 11514 - lncRNA gene predicted gene, 32700
Tssr143 1 86433973 to 86433978 5 + TSS region transcription start site region 143
Cpgi506 1 86434217 to 86434944 727 CpG island CpG island 506
Tssr7755 1 86434604 to 86434656 52 + TSS region transcription start site region 7755
4930401B06Rik 1 86434694 to 86436035 1341 unclassified gene RIKEN cDNA 4930401B06 gene
Tssr12795 1 86438045 to 86438057 12 - TSS region transcription start site region 12795
Cpgi507 1 86441981 to 86443265 1284 CpG island CpG island 507
Tssr12796 1 86442480 to 86442491 11 - TSS region transcription start site region 12796
Tssr12797 1 86442538 to 86442554 16 - TSS region transcription start site region 12797
Gm32758 1 86456652 to 86465317 8665 - lncRNA gene predicted gene, 32758
Gm41907 1 86465724 to 86473126 7402 - lncRNA gene predicted gene, 41907
Tssr12798 1 86467421 to 86467439 18 - TSS region transcription start site region 12798
Tssr12799 1 86467466 to 86467492 26 - TSS region transcription start site region 12799