Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:86226042-86356770

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Emo4 1 68032186 to 86307305 18275119 QTL emotionality 4
Armc9 1 86154780 to 86278284 123504 + protein coding gene armadillo repeat containing 9
Tssr12763 1 86226557 to 86226598 41 - TSS region transcription start site region 12763
Tssr7734 1 86234023 to 86234035 12 + TSS region transcription start site region 7734
Gm46098 1 86245335 to 86256796 11461 - lncRNA gene predicted gene, 46098
Gm16341 1 86281042 to 86301770 20728 - antisense lncRNA gene predicted gene 16341
Tssr12764 1 86301354 to 86301366 12 - TSS region transcription start site region 12764
Tssr12765 1 86301388 to 86301404 16 - TSS region transcription start site region 12765
Cpgi501 1 86302915 to 86304178 1263 CpG island CpG island 501
Gm28626 1 86303195 to 86304059 864 - antisense lncRNA gene predicted gene 28626
B3gnt7 1 86303221 to 86307305 4084 + protein coding gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
Tssr7735 1 86303225 to 86303239 14 + TSS region transcription start site region 7735
Tssr7736 1 86303437 to 86303446 9 + TSS region transcription start site region 7736
Tssr7737 1 86303453 to 86303482 29 + TSS region transcription start site region 7737
Tssr7738 1 86303489 to 86303503 14 + TSS region transcription start site region 7738
Tssr7739 1 86306777 to 86306802 25 + TSS region transcription start site region 7739
Tssr12766 1 86308394 to 86308403 9 - TSS region transcription start site region 12766
Tssr7740 1 86308555 to 86308578 23 + TSS region transcription start site region 7740
Tssr7741 1 86312605 to 86312609 4 + TSS region transcription start site region 7741
Cpgi502 1 86313576 to 86314073 497 CpG island CpG island 502
Gm5258 1 86323267 to 86323593 326 + pseudogene predicted gene 5258
Gm28627 1 86328039 to 86328873 834 + pseudogene predicted gene 28627
Ncl 1 86344719 to 86359400 14681 - protein coding gene nucleolin
Tssr141 1 86347639 to 86347674 35 - TSS region transcription start site region 141
Tssr12767 1 86348014 to 86348018 4 - TSS region transcription start site region 12767
Tssr7742 1 86350645 to 86350666 21 + TSS region transcription start site region 7742
Tssr7743 1 86350809 to 86350845 36 + TSS region transcription start site region 7743
Tssr12768 1 86351029 to 86351037 8 - TSS region transcription start site region 12768
Snora75 1 86351170 to 86351285 115 - snoRNA gene small nucleolar RNA, H/ACA box 75
Tssr12769 1 86351399 to 86351425 26 - TSS region transcription start site region 12769
Mir3535 1 86351981 to 86352127 146 - miRNA gene microRNA 3535
Gm24148 1 86352008 to 86352087 79 - snoRNA gene predicted gene, 24148
Tssr12770 1 86352084 to 86352088 4 - TSS region transcription start site region 12770
Tssr12771 1 86353252 to 86353283 31 - TSS region transcription start site region 12771
Tssr12772 1 86353810 to 86353859 49 - TSS region transcription start site region 12772
Tssr12773 1 86356179 to 86356198 19 - TSS region transcription start site region 12773
Snord82 1 86356260 to 86356327 67 - snoRNA gene small nucleolar RNA, C/D box 82
Tssr12774 1 86356303 to 86356328 25 - TSS region transcription start site region 12774
Tssr7744 1 86356393 to 86356427 34 + TSS region transcription start site region 7744
Tssr12775 1 86356452 to 86356464 12 - TSS region transcription start site region 12775
Tssr7745 1 86356552 to 86356633 81 + TSS region transcription start site region 7745
Tssr12776 1 86356638 to 86356651 13 - TSS region transcription start site region 12776