Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:86026974-86196984

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spata3 1 86017841 to 86029958 12117 + protein coding gene spermatogenesis associated 3
Tssr7715 1 86039638 to 86039643 5 + TSS region transcription start site region 7715
Tssr140 1 86039659 to 86039662 3 + TSS region transcription start site region 140
Tssr7716 1 86039663 to 86039674 11 + TSS region transcription start site region 7716
Cpgi497 1 86045669 to 86046787 1118 CpG island CpG island 497
2810459M11Rik 1 86045863 to 86055456 9593 + protein coding gene RIKEN cDNA 2810459M11 gene
Tssr7717 1 86045920 to 86045968 48 + TSS region transcription start site region 7717
Cpgi498 1 86047040 to 86047350 310 CpG island CpG island 498
Tssr7718 1 86053043 to 86053072 29 + TSS region transcription start site region 7718
Tssr7719 1 86053865 to 86053879 14 + TSS region transcription start site region 7719
Cpgi499 1 86064526 to 86065158 632 CpG island CpG island 499
Psmd1 1 86064619 to 86139295 74676 + protein coding gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
Tssr7720 1 86064625 to 86064648 23 + TSS region transcription start site region 7720
Tssr7721 1 86064649 to 86064681 32 + TSS region transcription start site region 7721
Gm22786 1 86087301 to 86087422 121 + snoRNA gene predicted gene, 22786
Htr2b 1 86099026 to 86111970 12944 - protein coding gene 5-hydroxytryptamine (serotonin) receptor 2B
Tssr12753 1 86110749 to 86110761 12 - TSS region transcription start site region 12753
Tssr12754 1 86110766 to 86110775 9 - TSS region transcription start site region 12754
Tssr12755 1 86110826 to 86110849 23 - TSS region transcription start site region 12755
Tssr7722 1 86110855 to 86110862 7 + TSS region transcription start site region 7722
Tssr7723 1 86110889 to 86110905 16 + TSS region transcription start site region 7723
Tssr7724 1 86110950 to 86110973 23 + TSS region transcription start site region 7724
Tssr7725 1 86110976 to 86110983 7 + TSS region transcription start site region 7725
Tssr7726 1 86110988 to 86110999 11 + TSS region transcription start site region 7726
Tssr7727 1 86111004 to 86111011 7 + TSS region transcription start site region 7727
Tssr7728 1 86111021 to 86111024 3 + TSS region transcription start site region 7728
Tssr12756 1 86111909 to 86111927 18 - TSS region transcription start site region 12756
Tssr12757 1 86111974 to 86111984 10 - TSS region transcription start site region 12757
Tssr12758 1 86111996 to 86112031 35 - TSS region transcription start site region 12758
Gm37914 1 86120883 to 86123561 2678 + unclassified gene predicted gene, 37914
Tssr12759 1 86124453 to 86124456 3 - TSS region transcription start site region 12759
Tssr7729 1 86128192 to 86128211 19 + TSS region transcription start site region 7729
Tssr7730 1 86128250 to 86128271 21 + TSS region transcription start site region 7730
Tssr7731 1 86132693 to 86132739 46 + TSS region transcription start site region 7731
Gm21972 1 86133637 to 86162788 29151 + protein coding gene predicted gene 21972
D1Mit83 1 86146986 to 86147135 149 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 83
Cpgi500 1 86154459 to 86155074 615 CpG island CpG island 500
Tssr12760 1 86154598 to 86154607 9 - TSS region transcription start site region 12760
Tssr12761 1 86154620 to 86154634 14 - TSS region transcription start site region 12761
Tssr7732 1 86154752 to 86154821 69 + TSS region transcription start site region 7732
Armc9 1 86154780 to 86278284 123504 + protein coding gene armadillo repeat containing 9
Tssr7733 1 86191032 to 86191053 21 + TSS region transcription start site region 7733