Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:85971836-86071850

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41905 1 85957113 to 85973340 16227 + lncRNA gene predicted gene, 41905
Gm28100 1 85972365 to 85986917 14552 - lincRNA gene predicted gene 28100
Tssr12749 1 85986917 to 85986951 34 - TSS region transcription start site region 12749
Tssr12750 1 85991458 to 85991468 10 - TSS region transcription start site region 12750
Tssr12751 1 85991477 to 85991496 19 - TSS region transcription start site region 12751
Gm18180 1 86014403 to 86015886 1483 - pseudogene predicted gene, 18180
Spata3 1 86017841 to 86029958 12117 + protein coding gene spermatogenesis associated 3
Cpgi496 1 86018040 to 86018906 866 CpG island CpG island 496
Tssr7708 1 86018068 to 86018084 16 + TSS region transcription start site region 7708
Tssr12752 1 86021836 to 86021850 14 - TSS region transcription start site region 12752
Tssr7709 1 86021935 to 86021953 18 + TSS region transcription start site region 7709
Tssr7710 1 86021959 to 86021972 13 + TSS region transcription start site region 7710
Tssr7711 1 86022163 to 86022176 13 + TSS region transcription start site region 7711
Tssr7712 1 86026203 to 86026213 10 + TSS region transcription start site region 7712
Tssr7713 1 86026387 to 86026407 20 + TSS region transcription start site region 7713
Tssr7714 1 86026426 to 86026448 22 + TSS region transcription start site region 7714
Tssr7715 1 86039638 to 86039643 5 + TSS region transcription start site region 7715
Tssr140 1 86039659 to 86039662 3 + TSS region transcription start site region 140
Tssr7716 1 86039663 to 86039674 11 + TSS region transcription start site region 7716
Cpgi497 1 86045669 to 86046787 1118 CpG island CpG island 497
2810459M11Rik 1 86045863 to 86055456 9593 + protein coding gene RIKEN cDNA 2810459M11 gene
Tssr7717 1 86045920 to 86045968 48 + TSS region transcription start site region 7717
Cpgi498 1 86047040 to 86047350 310 CpG island CpG island 498
Tssr7718 1 86053043 to 86053072 29 + TSS region transcription start site region 7718
Tssr7719 1 86053865 to 86053879 14 + TSS region transcription start site region 7719
Cpgi499 1 86064526 to 86065158 632 CpG island CpG island 499
Psmd1 1 86064619 to 86139295 74676 + protein coding gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
Tssr7720 1 86064625 to 86064648 23 + TSS region transcription start site region 7720
Tssr7721 1 86064649 to 86064681 32 + TSS region transcription start site region 7721