Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:85111729-85557615

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
A530040E14Rik 1 85105946 to 85114035 8089 + antisense lncRNA gene RIKEN cDNA A530040E14 gene
Gm35498 1 85112445 to 85118523 6078 - protein coding gene predicted gene, 35498
Tssr12726 1 85112464 to 85112507 43 - TSS region transcription start site region 12726
Gm16038 1 85115319 to 85117237 1918 + pseudogene predicted gene 16038
Gm46097 1 85140080 to 85143762 3682 - pseudogene predicted gene, 46097
Gm38510 1 85156899 to 85309015 152116 - protein coding gene predicted gene, 38510
Gm6264 1 85159764 to 85194260 34496 + pseudogene predicted gene 6264
Tssr7659 1 85199595 to 85199622 27 + TSS region transcription start site region 7659
Gm7609 1 85199613 to 85213786 14173 + pseudogene predicted pseudogene 7609
C130026I21Rik 1 85241286 to 85270866 29580 - protein coding gene RIKEN cDNA C130026I21 gene
Gm16028 1 85246851 to 85255465 8614 + antisense lncRNA gene predicted gene 16028
Gm16026 1 85266698 to 85285491 18793 + pseudogene predicted pseudogene 16026
Cpgi487 1 85272300 to 85272500 200 CpG island CpG island 487
Tssr7660 1 85272400 to 85272416 16 + TSS region transcription start site region 7660
Tssr7661 1 85276899 to 85276947 48 + TSS region transcription start site region 7661
Cpgi488 1 85276973 to 85277154 181 CpG island CpG island 488
Gm2619 1 85313407 to 85317321 3914 - pseudogene predicted gene 2619
Tssr137 1 85326708 to 85326716 8 + TSS region transcription start site region 137
Gm16025 1 85326729 to 85342615 15886 + lincRNA gene predicted gene 16025
Tssr138 1 85330434 to 85330435 1 + TSS region transcription start site region 138
Gm7281 1 85332716 to 85342086 9370 - pseudogene predicted gene 7281
Gm2666 1 85484252 to 85485142 890 - pseudogene predicted gene 2666
Gm2427 1 85501090 to 85514604 13514 + pseudogene predicted gene 2427
Gm16092 1 85511133 to 85527161 16028 - lincRNA gene predicted gene 16092
Gm7592 1 85526690 to 85550577 23887 + pseudogene predicted gene 7592
D1Mit335 1 85528077 to 85528225 148 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 335