Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:84849613-85563786

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fbxo36 1 84839841 to 84900487 60646 + protein coding gene F-box protein 36
Tssr12719 1 84850000 to 84850014 14 - TSS region transcription start site region 12719
Tssr12720 1 84850036 to 84850045 9 - TSS region transcription start site region 12720
Tssr12721 1 84868229 to 84868233 4 - TSS region transcription start site region 12721
Tssr12722 1 84868959 to 84868996 37 - TSS region transcription start site region 12722
Tssr7653 1 84869146 to 84869163 17 + TSS region transcription start site region 7653
Tssr7654 1 84882129 to 84882175 46 + TSS region transcription start site region 7654
Tssr12723 1 84891886 to 84891925 39 - TSS region transcription start site region 12723
Slc16a14 1 84905898 to 84935134 29236 - protein coding gene solute carrier family 16 (monocarboxylic acid transporters), member 14
Cpgi486 1 84934239 to 84935155 916 CpG island CpG island 486
Tssr12724 1 84935089 to 84935108 19 - TSS region transcription start site region 12724
Tssr12725 1 84935190 to 84935241 51 - TSS region transcription start site region 12725
Gm39669 1 84935272 to 84936017 745 + lncRNA gene predicted gene, 39669
Tssr7655 1 84939321 to 84939343 22 + TSS region transcription start site region 7655
Tssr7656 1 84952714 to 84952719 5 + TSS region transcription start site region 7656
Gm15433 1 84963669 to 84964559 890 + pseudogene predicted pseudogene 15433
Gm29284 1 84990638 to 84993032 2394 - pseudogene predicted gene 29284
Tssr7657 1 85012078 to 85012085 7 + TSS region transcription start site region 7657
Rpl19-ps1 1 85012114 to 85012704 590 + pseudogene ribosomal protein L19, pseudogene 1
Gm27907 1 85012367 to 85012446 79 + miRNA gene predicted gene, 27907
Gm7582 1 85026363 to 85028872 2509 - pseudogene predicted gene 7582
Gm2389 1 85061151 to 85062639 1488 + pseudogene predicted pseudogene 2389
Gm18342 1 85067647 to 85078223 10576 - pseudogene predicted gene, 18342
A530032D15Rik 1 85088139 to 85110502 22363 - protein coding gene RIKEN cDNA A530032D15Rik gene
Gm10553 1 85100164 to 85100535 371 + protein coding gene predicted gene 10553
A530040E14Rik 1 85105946 to 85114035 8089 + antisense lncRNA gene RIKEN cDNA A530040E14 gene
Tssr7658 1 85106089 to 85106093 4 + TSS region transcription start site region 7658
Gm35498 1 85112445 to 85118523 6078 - protein coding gene predicted gene, 35498
Tssr12726 1 85112464 to 85112507 43 - TSS region transcription start site region 12726
Gm16038 1 85115319 to 85117237 1918 + pseudogene predicted gene 16038
Gm46097 1 85140080 to 85143762 3682 - pseudogene predicted gene, 46097
Gm38510 1 85156899 to 85309015 152116 - protein coding gene predicted gene, 38510
Gm6264 1 85159764 to 85194260 34496 + pseudogene predicted gene 6264
Tssr7659 1 85199595 to 85199622 27 + TSS region transcription start site region 7659
Gm7609 1 85199613 to 85213786 14173 + pseudogene predicted pseudogene 7609
C130026I21Rik 1 85241286 to 85270866 29580 - protein coding gene RIKEN cDNA C130026I21 gene
Gm16028 1 85246851 to 85255465 8614 + antisense lncRNA gene predicted gene 16028
Gm16026 1 85266698 to 85285491 18793 + pseudogene predicted pseudogene 16026
Cpgi487 1 85272300 to 85272500 200 CpG island CpG island 487
Tssr7660 1 85272400 to 85272416 16 + TSS region transcription start site region 7660
Tssr7661 1 85276899 to 85276947 48 + TSS region transcription start site region 7661
Cpgi488 1 85276973 to 85277154 181 CpG island CpG island 488
Gm2619 1 85313407 to 85317321 3914 - pseudogene predicted gene 2619
Tssr137 1 85326708 to 85326716 8 + TSS region transcription start site region 137
Gm16025 1 85326729 to 85342615 15886 + lincRNA gene predicted gene 16025
Tssr138 1 85330434 to 85330435 1 + TSS region transcription start site region 138
Gm7281 1 85332716 to 85342086 9370 - pseudogene predicted gene 7281
Gm2666 1 85484252 to 85485142 890 - pseudogene predicted gene 2666
Gm2427 1 85501090 to 85514604 13514 + pseudogene predicted gene 2427
Gm16092 1 85511133 to 85527161 16028 - lincRNA gene predicted gene 16092
Gm7592 1 85526690 to 85550577 23887 + pseudogene predicted gene 7592
D1Mit335 1 85528077 to 85528225 148 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 335