Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:84282256-84872377

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pid1 1 84036293 to 84339845 303552 - protein coding gene phosphotyrosine interaction domain containing 1
Tssr12664 1 84282881 to 84282890 9 - TSS region transcription start site region 12664
Cpgi483 1 84283998 to 84284886 888 CpG island CpG island 483
Tssr12665 1 84284478 to 84284489 11 - TSS region transcription start site region 12665
Tssr12666 1 84284526 to 84284537 11 - TSS region transcription start site region 12666
Tssr12667 1 84284548 to 84284628 80 - TSS region transcription start site region 12667
Tssr12668 1 84284818 to 84284856 38 - TSS region transcription start site region 12668
Tssr12669 1 84341077 to 84341097 20 - TSS region transcription start site region 12669
Tssr7648 1 84362664 to 84362670 6 + TSS region transcription start site region 7648
Tssr12670 1 84363250 to 84363259 9 - TSS region transcription start site region 12670
Tssr12671 1 84363281 to 84363298 17 - TSS region transcription start site region 12671
Tssr12672 1 84363774 to 84363785 11 - TSS region transcription start site region 12672
Tssr12673 1 84363796 to 84363808 12 - TSS region transcription start site region 12673
Dner 1 84369839 to 84696221 326382 - protein coding gene delta/notch-like EGF repeat containing
Tssr12674 1 84370501 to 84370504 3 - TSS region transcription start site region 12674
Gm37959 1 84392503 to 84395399 2896 - unclassified gene predicted gene, 37959
D1Mit438 1 84577256 to 84577377 121 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 438
Tssr12675 1 84580699 to 84580710 11 - TSS region transcription start site region 12675
Gm37925 1 84665189 to 84669443 4254 - unclassified gene predicted gene, 37925
Tssr12676 1 84669417 to 84669421 4 - TSS region transcription start site region 12676
Cpgi484 1 84695227 to 84696453 1226 CpG island CpG island 484
Tssr12677 1 84695552 to 84695563 11 - TSS region transcription start site region 12677
Tssr12678 1 84695752 to 84695766 14 - TSS region transcription start site region 12678
Tssr12679 1 84695767 to 84695778 11 - TSS region transcription start site region 12679
Tssr12680 1 84695784 to 84695868 84 - TSS region transcription start site region 12680
Mir5126 1 84695839 to 84695915 76 + miRNA gene microRNA 5126
Tssr12681 1 84695872 to 84695892 20 - TSS region transcription start site region 12681
Tssr12682 1 84695976 to 84695994 18 - TSS region transcription start site region 12682
Tssr12683 1 84696006 to 84696015 9 - TSS region transcription start site region 12683
Tssr12684 1 84696027 to 84696038 11 - TSS region transcription start site region 12684
Tssr12685 1 84696106 to 84696122 16 - TSS region transcription start site region 12685
Tssr12686 1 84696133 to 84696138 5 - TSS region transcription start site region 12686
Tssr12687 1 84696148 to 84696159 11 - TSS region transcription start site region 12687
Tssr12688 1 84696166 to 84696178 12 - TSS region transcription start site region 12688
Tssr12689 1 84696182 to 84696202 20 - TSS region transcription start site region 12689
Tssr12690 1 84696247 to 84696261 14 - TSS region transcription start site region 12690
Tssr7649 1 84710354 to 84710383 29 + TSS region transcription start site region 7649
Trip12 1 84721189 to 84840516 119327 - protein coding gene thyroid hormone receptor interactor 12
C130021H21Rik 1 84740929 to 84742044 1115 unclassified gene RIKEN cDNA C130021H21 gene
Tssr12691 1 84742014 to 84742018 4 - TSS region transcription start site region 12691
Tssr12692 1 84745161 to 84745200 39 - TSS region transcription start site region 12692
Tssr12693 1 84750537 to 84750540 3 - TSS region transcription start site region 12693
Tssr12694 1 84766030 to 84766055 25 - TSS region transcription start site region 12694
Tssr12695 1 84786126 to 84786135 9 - TSS region transcription start site region 12695
Gm38374 1 84807158 to 84809190 2032 - unclassified gene predicted gene, 38374
Tssr12696 1 84811654 to 84811658 4 - TSS region transcription start site region 12696
Tssr12697 1 84814880 to 84814895 15 - TSS region transcription start site region 12697
Gm37738 1 84819968 to 84824683 4715 - unclassified gene predicted gene, 37738
Tssr12698 1 84824918 to 84824920 2 - TSS region transcription start site region 12698
Tssr12699 1 84837796 to 84837809 13 - TSS region transcription start site region 12699
Tssr12700 1 84837829 to 84837840 11 - TSS region transcription start site region 12700
Cpgi485 1 84838328 to 84840412 2084 CpG island CpG island 485
Tssr12701 1 84838658 to 84838740 82 - TSS region transcription start site region 12701
Tssr12702 1 84838985 to 84839022 37 - TSS region transcription start site region 12702
Tssr12703 1 84839280 to 84839289 9 - TSS region transcription start site region 12703
Tssr12704 1 84839310 to 84839321 11 - TSS region transcription start site region 12704
Tssr12705 1 84839322 to 84839391 69 - TSS region transcription start site region 12705
Tssr12706 1 84839420 to 84839441 21 - TSS region transcription start site region 12706
Tssr12707 1 84839451 to 84839462 11 - TSS region transcription start site region 12707
Tssr7650 1 84839459 to 84839475 16 + TSS region transcription start site region 7650
Tssr12708 1 84839479 to 84839490 11 - TSS region transcription start site region 12708
Tssr12709 1 84839528 to 84839535 7 - TSS region transcription start site region 12709
Tssr12710 1 84839579 to 84839591 12 - TSS region transcription start site region 12710
Tssr7651 1 84839607 to 84839639 32 + TSS region transcription start site region 7651
Tssr12711 1 84839744 to 84839752 8 - TSS region transcription start site region 12711
Tssr7652 1 84839833 to 84839875 42 + TSS region transcription start site region 7652
Fbxo36 1 84839841 to 84900487 60646 + protein coding gene F-box protein 36
Tssr136 1 84839908 to 84839916 8 + TSS region transcription start site region 136
Tssr12712 1 84840193 to 84840202 9 - TSS region transcription start site region 12712
Tssr12713 1 84840231 to 84840246 15 - TSS region transcription start site region 12713
Tssr12714 1 84840258 to 84840274 16 - TSS region transcription start site region 12714
Tssr12715 1 84840286 to 84840325 39 - TSS region transcription start site region 12715
Tssr12716 1 84840465 to 84840479 14 - TSS region transcription start site region 12716
Tssr12717 1 84840502 to 84840540 38 - TSS region transcription start site region 12717
Tssr12718 1 84840596 to 84840612 16 - TSS region transcription start site region 12718
Tssr12719 1 84850000 to 84850014 14 - TSS region transcription start site region 12719
Tssr12720 1 84850036 to 84850045 9 - TSS region transcription start site region 12720
Tssr12721 1 84868229 to 84868233 4 - TSS region transcription start site region 12721
Tssr12722 1 84868959 to 84868996 37 - TSS region transcription start site region 12722
Tssr7653 1 84869146 to 84869163 17 + TSS region transcription start site region 7653