Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:83081077-85601097

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297 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr7643 1 83116760 to 83116776 16 + TSS region transcription start site region 7643
Ccl20 1 83116766 to 83119167 2401 + protein coding gene chemokine (C-C motif) ligand 20
Gm29519 1 83157984 to 83159017 1033 + pseudogene predicted gene 29519
Cpgi481 1 83159658 to 83159924 266 CpG island CpG island 481
Tssr7644 1 83159733 to 83159773 40 + TSS region transcription start site region 7644
Daw1 1 83159752 to 83210574 50822 + protein coding gene dynein assembly factor with WDR repeat domains 1
Gm6244 1 83212047 to 83212884 837 - pseudogene predicted gene 6244
n-R5s214 1 83216671 to 83216791 120 - rRNA gene nuclear encoded rRNA 5S 214
Sphkap 1 83255442 to 83408393 152951 - protein coding gene SPHK1 interactor, AKAP domain containing
Tssr12535 1 83277106 to 83277145 39 - TSS region transcription start site region 12535
Tssr12536 1 83277148 to 83277164 16 - TSS region transcription start site region 12536
Tssr12537 1 83277201 to 83277212 11 - TSS region transcription start site region 12537
Tssr12538 1 83277228 to 83277242 14 - TSS region transcription start site region 12538
Tssr12539 1 83277332 to 83277344 12 - TSS region transcription start site region 12539
Tssr12540 1 83278796 to 83278828 32 - TSS region transcription start site region 12540
Tssr7645 1 83314451 to 83314471 20 + TSS region transcription start site region 7645
Gm6374 1 83314513 to 83315300 787 + pseudogene predicted gene 6374
Gm37517 1 83331298 to 83332586 1288 - unclassified gene predicted gene, 37517
Cpgi482 1 83407878 to 83408309 431 CpG island CpG island 482
Tssr12541 1 83408030 to 83408040 10 - TSS region transcription start site region 12541
Tssr12542 1 83408058 to 83408152 94 - TSS region transcription start site region 12542
Tssr12543 1 83408159 to 83408181 22 - TSS region transcription start site region 12543
Tssr12544 1 83408190 to 83408222 32 - TSS region transcription start site region 12544
Tssr12545 1 83408267 to 83408290 23 - TSS region transcription start site region 12545
Gm37989 1 83426596 to 83427398 802 - unclassified gene predicted gene, 37989
4933436I20Rik 1 83659550 to 83911644 252094 - lincRNA gene RIKEN cDNA 4933436I20 gene
D1Mit384 1 83666892 to 83667015 123 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 384
D1Mit255 1 83694017 to 83694157 140 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 255
Gm25754 1 83795912 to 83796032 120 + miRNA gene predicted gene, 25754
Tssr7646 1 83836026 to 83836027 1 + TSS region transcription start site region 7646
Gm24555 1 83921918 to 83922041 123 + snoRNA gene predicted gene, 24555
Pid1 1 84036293 to 84339845 303552 - protein coding gene phosphotyrosine interaction domain containing 1
Tssr12546 1 84036687 to 84036699 12 - TSS region transcription start site region 12546
Tssr12547 1 84037273 to 84037286 13 - TSS region transcription start site region 12547
Tssr12548 1 84037439 to 84037463 24 - TSS region transcription start site region 12548
Tssr12549 1 84037464 to 84037485 21 - TSS region transcription start site region 12549
Tssr12550 1 84053433 to 84053438 5 - TSS region transcription start site region 12550
Tssr12551 1 84054563 to 84054584 21 - TSS region transcription start site region 12551
Tssr12552 1 84059103 to 84059116 13 - TSS region transcription start site region 12552
Tssr12553 1 84069080 to 84069104 24 - TSS region transcription start site region 12553
Tssr12554 1 84072055 to 84072082 27 - TSS region transcription start site region 12554
Tssr12555 1 84102306 to 84102308 2 - TSS region transcription start site region 12555
Tssr12556 1 84105594 to 84105629 35 - TSS region transcription start site region 12556
Tssr12557 1 84105653 to 84105669 16 - TSS region transcription start site region 12557
Tssr12558 1 84105679 to 84105692 13 - TSS region transcription start site region 12558
Tssr12559 1 84105707 to 84105738 31 - TSS region transcription start site region 12559
Tssr12560 1 84105754 to 84105765 11 - TSS region transcription start site region 12560
Tssr12561 1 84115009 to 84115017 8 - TSS region transcription start site region 12561
Tssr12562 1 84128402 to 84128424 22 - TSS region transcription start site region 12562
Tssr12563 1 84130916 to 84130921 5 - TSS region transcription start site region 12563
Tssr12564 1 84131201 to 84131217 16 - TSS region transcription start site region 12564
Tssr12565 1 84131289 to 84131305 16 - TSS region transcription start site region 12565
Tssr12566 1 84131329 to 84131340 11 - TSS region transcription start site region 12566
Tssr12567 1 84131758 to 84131770 12 - TSS region transcription start site region 12567
Tssr12568 1 84131821 to 84131831 10 - TSS region transcription start site region 12568
Gm37058 1 84132867 to 84134510 1643 - unclassified gene predicted gene, 37058
Tssr12569 1 84134188 to 84134241 53 - TSS region transcription start site region 12569
Tssr12570 1 84134306 to 84134330 24 - TSS region transcription start site region 12570
Tssr12571 1 84136797 to 84136809 12 - TSS region transcription start site region 12571
Tssr12572 1 84137467 to 84137478 11 - TSS region transcription start site region 12572
Tssr12573 1 84137486 to 84137500 14 - TSS region transcription start site region 12573
Tssr12574 1 84137924 to 84137935 11 - TSS region transcription start site region 12574
Tssr12575 1 84137988 to 84138005 17 - TSS region transcription start site region 12575
Tssr12576 1 84139284 to 84139298 14 - TSS region transcription start site region 12576
Tssr12577 1 84139316 to 84139350 34 - TSS region transcription start site region 12577
Tssr12578 1 84139617 to 84139631 14 - TSS region transcription start site region 12578
Tssr12579 1 84139925 to 84139943 18 - TSS region transcription start site region 12579
Tssr12580 1 84140264 to 84140276 12 - TSS region transcription start site region 12580
Tssr12581 1 84140279 to 84140290 11 - TSS region transcription start site region 12581
Tssr12582 1 84140540 to 84140554 14 - TSS region transcription start site region 12582
Tssr12583 1 84140998 to 84141012 14 - TSS region transcription start site region 12583
Tssr12584 1 84141063 to 84141076 13 - TSS region transcription start site region 12584
Tssr12585 1 84144511 to 84144520 9 - TSS region transcription start site region 12585
Tssr12586 1 84144540 to 84144552 12 - TSS region transcription start site region 12586
Tssr12587 1 84146785 to 84146790 5 - TSS region transcription start site region 12587
Tssr12588 1 84147390 to 84147400 10 - TSS region transcription start site region 12588
Tssr12589 1 84148368 to 84148372 4 - TSS region transcription start site region 12589
Tssr12590 1 84150190 to 84150205 15 - TSS region transcription start site region 12590
Tssr12591 1 84150476 to 84150488 12 - TSS region transcription start site region 12591
Tssr12592 1 84150834 to 84150845 11 - TSS region transcription start site region 12592
Tssr12593 1 84150869 to 84150881 12 - TSS region transcription start site region 12593
Tssr12594 1 84150921 to 84150936 15 - TSS region transcription start site region 12594
Tssr12595 1 84151303 to 84151332 29 - TSS region transcription start site region 12595
Tssr12596 1 84152962 to 84152975 13 - TSS region transcription start site region 12596
Tssr12597 1 84154758 to 84154763 5 - TSS region transcription start site region 12597
Tssr12598 1 84155349 to 84155352 3 - TSS region transcription start site region 12598
Tssr12599 1 84155954 to 84155962 8 - TSS region transcription start site region 12599
Tssr12600 1 84156071 to 84156093 22 - TSS region transcription start site region 12600
Tssr12601 1 84157188 to 84157222 34 - TSS region transcription start site region 12601
Tssr12602 1 84157231 to 84157237 6 - TSS region transcription start site region 12602
Tssr12603 1 84157286 to 84157305 19 - TSS region transcription start site region 12603
Tssr12604 1 84157306 to 84157325 19 - TSS region transcription start site region 12604
Tssr12605 1 84157335 to 84157349 14 - TSS region transcription start site region 12605
Tssr12606 1 84157434 to 84157445 11 - TSS region transcription start site region 12606
Tssr12607 1 84158263 to 84158273 10 - TSS region transcription start site region 12607
Tssr12608 1 84158638 to 84158669 31 - TSS region transcription start site region 12608
Gm18304 1 84168188 to 84168730 542 + pseudogene predicted gene, 18304
Tssr12609 1 84179108 to 84179126 18 - TSS region transcription start site region 12609
Tssr12610 1 84181516 to 84181527 11 - TSS region transcription start site region 12610
Tssr12611 1 84183098 to 84183102 4 - TSS region transcription start site region 12611
Tssr12612 1 84187072 to 84187082 10 - TSS region transcription start site region 12612
Tssr12613 1 84192073 to 84192100 27 - TSS region transcription start site region 12613
Tssr12614 1 84194236 to 84194247 11 - TSS region transcription start site region 12614
Tssr12615 1 84194349 to 84194362 13 - TSS region transcription start site region 12615
Tssr12616 1 84194458 to 84194471 13 - TSS region transcription start site region 12616
Tssr12617 1 84198425 to 84198440 15 - TSS region transcription start site region 12617
Tssr12618 1 84200333 to 84200358 25 - TSS region transcription start site region 12618
Tssr12619 1 84200407 to 84200421 14 - TSS region transcription start site region 12619
Tssr12620 1 84200477 to 84200487 10 - TSS region transcription start site region 12620
Tssr12621 1 84200551 to 84200565 14 - TSS region transcription start site region 12621
Tssr12622 1 84203099 to 84203103 4 - TSS region transcription start site region 12622
Tssr12623 1 84204792 to 84204832 40 - TSS region transcription start site region 12623
Tssr12624 1 84205823 to 84205851 28 - TSS region transcription start site region 12624
Tssr12625 1 84208792 to 84208796 4 - TSS region transcription start site region 12625
Mir6353 1 84218849 to 84218961 112 - miRNA gene microRNA 6353
Tssr12626 1 84224636 to 84224642 6 - TSS region transcription start site region 12626
Tssr12627 1 84225087 to 84225098 11 - TSS region transcription start site region 12627
Tssr12628 1 84225678 to 84225691 13 - TSS region transcription start site region 12628
Tssr12629 1 84230234 to 84230247 13 - TSS region transcription start site region 12629
Tssr12630 1 84230545 to 84230553 8 - TSS region transcription start site region 12630
Tssr12631 1 84232955 to 84232968 13 - TSS region transcription start site region 12631
Tssr12632 1 84232980 to 84233031 51 - TSS region transcription start site region 12632
Tssr12633 1 84233305 to 84233317 12 - TSS region transcription start site region 12633
Tssr12634 1 84233388 to 84233390 2 - TSS region transcription start site region 12634
Tssr12635 1 84233486 to 84233522 36 - TSS region transcription start site region 12635
Tssr12636 1 84234109 to 84234118 9 - TSS region transcription start site region 12636
Tssr12637 1 84235314 to 84235319 5 - TSS region transcription start site region 12637
Tssr12638 1 84236924 to 84236935 11 - TSS region transcription start site region 12638
Tssr12639 1 84237721 to 84237743 22 - TSS region transcription start site region 12639
Tssr12640 1 84238172 to 84238190 18 - TSS region transcription start site region 12640
Tssr135 1 84242529 to 84242531 2 + TSS region transcription start site region 135
Tssr12641 1 84243558 to 84243581 23 - TSS region transcription start site region 12641
Tssr12642 1 84245164 to 84245176 12 - TSS region transcription start site region 12642
Tssr12643 1 84245236 to 84245256 20 - TSS region transcription start site region 12643
Tssr12644 1 84247749 to 84247776 27 - TSS region transcription start site region 12644
Tssr12645 1 84251305 to 84251343 38 - TSS region transcription start site region 12645
Tssr12646 1 84253586 to 84253590 4 - TSS region transcription start site region 12646
Tssr12647 1 84257522 to 84257530 8 - TSS region transcription start site region 12647
Tssr12648 1 84258212 to 84258242 30 - TSS region transcription start site region 12648
Tssr12649 1 84262204 to 84262211 7 - TSS region transcription start site region 12649
Tssr12650 1 84262537 to 84262589 52 - TSS region transcription start site region 12650
Tssr12651 1 84262641 to 84262663 22 - TSS region transcription start site region 12651
Tssr12652 1 84262755 to 84262787 32 - TSS region transcription start site region 12652
Tssr12653 1 84262790 to 84262823 33 - TSS region transcription start site region 12653
Tssr12654 1 84275088 to 84275114 26 - TSS region transcription start site region 12654
Tssr7647 1 84276891 to 84276894 3 + TSS region transcription start site region 7647
Tssr12655 1 84278295 to 84278320 25 - TSS region transcription start site region 12655
Tssr12656 1 84278343 to 84278379 36 - TSS region transcription start site region 12656
Tssr12657 1 84278417 to 84278436 19 - TSS region transcription start site region 12657
Tssr12658 1 84278446 to 84278459 13 - TSS region transcription start site region 12658
Tssr12659 1 84278473 to 84278486 13 - TSS region transcription start site region 12659
Tssr12660 1 84278919 to 84278932 13 - TSS region transcription start site region 12660
Tssr12661 1 84279931 to 84279942 11 - TSS region transcription start site region 12661
Tssr12662 1 84281937 to 84281949 12 - TSS region transcription start site region 12662
Tssr12663 1 84281986 to 84282000 14 - TSS region transcription start site region 12663
Tssr12664 1 84282881 to 84282890 9 - TSS region transcription start site region 12664
Cpgi483 1 84283998 to 84284886 888 CpG island CpG island 483
Tssr12665 1 84284478 to 84284489 11 - TSS region transcription start site region 12665
Tssr12666 1 84284526 to 84284537 11 - TSS region transcription start site region 12666
Tssr12667 1 84284548 to 84284628 80 - TSS region transcription start site region 12667
Tssr12668 1 84284818 to 84284856 38 - TSS region transcription start site region 12668
Tssr12669 1 84341077 to 84341097 20 - TSS region transcription start site region 12669
Tssr7648 1 84362664 to 84362670 6 + TSS region transcription start site region 7648
Tssr12670 1 84363250 to 84363259 9 - TSS region transcription start site region 12670
Tssr12671 1 84363281 to 84363298 17 - TSS region transcription start site region 12671
Tssr12672 1 84363774 to 84363785 11 - TSS region transcription start site region 12672
Tssr12673 1 84363796 to 84363808 12 - TSS region transcription start site region 12673
Dner 1 84369839 to 84696221 326382 - protein coding gene delta/notch-like EGF repeat containing
Tssr12674 1 84370501 to 84370504 3 - TSS region transcription start site region 12674
Gm37959 1 84392503 to 84395399 2896 - unclassified gene predicted gene, 37959
D1Mit438 1 84577256 to 84577377 121 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 438
Tssr12675 1 84580699 to 84580710 11 - TSS region transcription start site region 12675
Gm37925 1 84665189 to 84669443 4254 - unclassified gene predicted gene, 37925
Tssr12676 1 84669417 to 84669421 4 - TSS region transcription start site region 12676
Cpgi484 1 84695227 to 84696453 1226 CpG island CpG island 484
Tssr12677 1 84695552 to 84695563 11 - TSS region transcription start site region 12677
Tssr12678 1 84695752 to 84695766 14 - TSS region transcription start site region 12678
Tssr12679 1 84695767 to 84695778 11 - TSS region transcription start site region 12679
Tssr12680 1 84695784 to 84695868 84 - TSS region transcription start site region 12680
Mir5126 1 84695839 to 84695915 76 + miRNA gene microRNA 5126
Tssr12681 1 84695872 to 84695892 20 - TSS region transcription start site region 12681
Tssr12682 1 84695976 to 84695994 18 - TSS region transcription start site region 12682
Tssr12683 1 84696006 to 84696015 9 - TSS region transcription start site region 12683
Tssr12684 1 84696027 to 84696038 11 - TSS region transcription start site region 12684
Tssr12685 1 84696106 to 84696122 16 - TSS region transcription start site region 12685
Tssr12686 1 84696133 to 84696138 5 - TSS region transcription start site region 12686
Tssr12687 1 84696148 to 84696159 11 - TSS region transcription start site region 12687
Tssr12688 1 84696166 to 84696178 12 - TSS region transcription start site region 12688
Tssr12689 1 84696182 to 84696202 20 - TSS region transcription start site region 12689
Tssr12690 1 84696247 to 84696261 14 - TSS region transcription start site region 12690
Tssr7649 1 84710354 to 84710383 29 + TSS region transcription start site region 7649
Trip12 1 84721189 to 84840516 119327 - protein coding gene thyroid hormone receptor interactor 12
C130021H21Rik 1 84740929 to 84742044 1115 unclassified gene RIKEN cDNA C130021H21 gene
Tssr12691 1 84742014 to 84742018 4 - TSS region transcription start site region 12691
Tssr12692 1 84745161 to 84745200 39 - TSS region transcription start site region 12692
Tssr12693 1 84750537 to 84750540 3 - TSS region transcription start site region 12693
Tssr12694 1 84766030 to 84766055 25 - TSS region transcription start site region 12694
Tssr12695 1 84786126 to 84786135 9 - TSS region transcription start site region 12695
Gm38374 1 84807158 to 84809190 2032 - unclassified gene predicted gene, 38374
Tssr12696 1 84811654 to 84811658 4 - TSS region transcription start site region 12696