Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:82830571-83031399

32 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dbf	1	59898872 to 82966353	23067481		heritable phenotypic marker	doublefoot
Gm34450	1	82824279 to 82836055	11776	+	lncRNA gene	predicted gene, 34450
Tssr12528	1	82832491 to 82832494	3	-	TSS region	transcription start site region 12528
Tssr12529	1	82832588 to 82832597	9	-	TSS region	transcription start site region 12529
Gm46096	1	82837681 to 82839350	1669	-	lncRNA gene	predicted gene, 46096
Cpgi478	1	82839054 to 82840410	1356		CpG island	CpG island 478
Gm22396	1	82839446 to 82839498	52	+	miRNA gene	predicted gene, 22396
Tssr7632	1	82839449 to 82839518	69	+	TSS region	transcription start site region 7632
Agfg1	1	82839460 to 82901001	61541	+	protein coding gene	ArfGAP with FG repeats 1
Tssr7633	1	82839560 to 82839571	11	+	TSS region	transcription start site region 7633
Tssr7634	1	82839651 to 82839684	33	+	TSS region	transcription start site region 7634
Tssr7635	1	82840155 to 82840171	16	+	TSS region	transcription start site region 7635
Tssr7636	1	82851201 to 82851209	8	+	TSS region	transcription start site region 7636
Tssr7637	1	82858359 to 82858409	50	+	TSS region	transcription start site region 7637
D1Ertd564e	1	82881046 to 82881278	232		DNA segment	DNA segment, Chr 1, ERATO Doi 564, expressed
Tssr7638	1	82913322 to 82913329	7	+	TSS region	transcription start site region 7638
A030005L19Rik	1	82913325 to 82914130	805	+	protein coding gene	RIKEN cDNA A030005L19 gene
Tssr7639	1	82924915 to 82924917	2	+	TSS region	transcription start site region 7639
A030014E15Rik	1	82924917 to 82925712	795	+	protein coding gene	RIKEN cDNA A030014E15 gene
Tssr7640	1	82925381 to 82925390	9	+	TSS region	transcription start site region 7640
Gm6217	1	82930571 to 82931399	828	-	protein coding gene	predicted gene 6217
A030003K21Rik	1	82942559 to 82943388	829	-	protein coding gene	RIKEN cDNA A030003K21 gene
Gm7544	1	82955186 to 82956013	827	-	protein coding gene	predicted gene 7544
Gm47955	1	82960286 to 82960924	638	+	protein coding gene	predicted gene, 47955
D1Mit8	1	82966131 to 82966353	222		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 8
Tssr12530	1	82994741 to 82994744	3	-	TSS region	transcription start site region 12530
Gm47959	1	83000548 to 83001480	932	+	protein coding gene	predicted gene, 47959
Gm7553	1	83003482 to 83004907	1425	-	pseudogene	predicted gene 7553
Cpgi479	1	83004530 to 83004726	196		CpG island	CpG island 479
Slc19a3	1	83012523 to 83038448	25925	-	protein coding gene	solute carrier family 19, member 3
Tssr7641	1	83015349 to 83015382	33	+	TSS region	transcription start site region 7641
Gm7539	1	83015393 to 83016022	629	+	pseudogene	predicted gene 7539