Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:82779917-83070712

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dbf 1 59898872 to 82966353 23067481 heritable phenotypic marker doublefoot
Tssr7627 1 82785937 to 82785939 2 + TSS region transcription start site region 7627
Tssr134 1 82796253 to 82796258 5 - TSS region transcription start site region 134
Tssr12525 1 82798450 to 82798462 12 - TSS region transcription start site region 12525
Gm36999 1 82806423 to 82807468 1045 - unclassified gene predicted gene, 36999
Gm34286 1 82808981 to 82816424 7443 + lncRNA gene predicted gene, 34286
Tssr12526 1 82810606 to 82810611 5 - TSS region transcription start site region 12526
Tssr7628 1 82819655 to 82819665 10 + TSS region transcription start site region 7628
Gm28942 1 82819835 to 82820377 542 + lincRNA gene predicted gene 28942
Tssr7629 1 82820120 to 82820125 5 + TSS region transcription start site region 7629
Tssr7630 1 82821712 to 82821716 4 + TSS region transcription start site region 7630
Gm17764 1 82822471 to 82822861 390 - pseudogene predicted gene, 17764
Gm34450 1 82824279 to 82836055 11776 + lncRNA gene predicted gene, 34450
Tssr7631 1 82824945 to 82824953 8 + TSS region transcription start site region 7631
Tssr12527 1 82827007 to 82827011 4 - TSS region transcription start site region 12527
Tssr12528 1 82832491 to 82832494 3 - TSS region transcription start site region 12528
Tssr12529 1 82832588 to 82832597 9 - TSS region transcription start site region 12529
Gm46096 1 82837681 to 82839350 1669 - lncRNA gene predicted gene, 46096
Cpgi478 1 82839054 to 82840410 1356 CpG island CpG island 478
Gm22396 1 82839446 to 82839498 52 + miRNA gene predicted gene, 22396
Tssr7632 1 82839449 to 82839518 69 + TSS region transcription start site region 7632
Agfg1 1 82839460 to 82901001 61541 + protein coding gene ArfGAP with FG repeats 1
Tssr7633 1 82839560 to 82839571 11 + TSS region transcription start site region 7633
Tssr7634 1 82839651 to 82839684 33 + TSS region transcription start site region 7634
Tssr7635 1 82840155 to 82840171 16 + TSS region transcription start site region 7635
Tssr7636 1 82851201 to 82851209 8 + TSS region transcription start site region 7636
Tssr7637 1 82858359 to 82858409 50 + TSS region transcription start site region 7637
D1Ertd564e 1 82881046 to 82881278 232 DNA segment DNA segment, Chr 1, ERATO Doi 564, expressed
Tssr7638 1 82913322 to 82913329 7 + TSS region transcription start site region 7638
A030005L19Rik 1 82913325 to 82914130 805 + protein coding gene RIKEN cDNA A030005L19 gene
Tssr7639 1 82924915 to 82924917 2 + TSS region transcription start site region 7639
A030014E15Rik 1 82924917 to 82925712 795 + protein coding gene RIKEN cDNA A030014E15 gene
Tssr7640 1 82925381 to 82925390 9 + TSS region transcription start site region 7640
Gm6217 1 82930571 to 82931399 828 - protein coding gene predicted gene 6217
A030003K21Rik 1 82942559 to 82943388 829 - protein coding gene RIKEN cDNA A030003K21 gene
Gm7544 1 82955186 to 82956013 827 - protein coding gene predicted gene 7544
Gm47955 1 82960286 to 82960924 638 + protein coding gene predicted gene, 47955
D1Mit8 1 82966131 to 82966353 222 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 8
Tssr12530 1 82994741 to 82994744 3 - TSS region transcription start site region 12530
Gm47959 1 83000548 to 83001480 932 + protein coding gene predicted gene, 47959
Gm7553 1 83003482 to 83004907 1425 - pseudogene predicted gene 7553
Cpgi479 1 83004530 to 83004726 196 CpG island CpG island 479
Slc19a3 1 83012523 to 83038448 25925 - protein coding gene solute carrier family 19, member 3
Tssr7641 1 83015349 to 83015382 33 + TSS region transcription start site region 7641
Gm7539 1 83015393 to 83016022 629 + pseudogene predicted gene 7539
Cpgi480 1 83038135 to 83038381 246 CpG island CpG island 480
Tssr12531 1 83038411 to 83038422 11 - TSS region transcription start site region 12531
Tssr12532 1 83038432 to 83038459 27 - TSS region transcription start site region 12532
Tssr12533 1 83038821 to 83038825 4 - TSS region transcription start site region 12533
Krtap28-10 1 83041524 to 83042480 956 - protein coding gene keratin associated protein 28-10
Gm47969 1 83044932 to 83045946 1014 + protein coding gene predicted gene, 47969
A030005K14Rik 1 83058286 to 83059378 1092 - unclassified non-coding RNA gene RIKEN cDNA A030005K14 gene
Tssr12534 1 83059369 to 83059377 8 - TSS region transcription start site region 12534
Tssr7642 1 83060927 to 83060933 6 + TSS region transcription start site region 7642
Krtap28-13 1 83060930 to 83061921 991 + protein coding gene keratin associated protein 28-13
Gm29518 1 83067102 to 83067473 371 + pseudogene predicted gene 29518