Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:82721307-82821310

25 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Col4a3	1	82586921 to 82722059	135138	+	protein coding gene	collagen, type IV, alpha 3
C430014B12Rik	1	82691928 to 82725169	33241	-	lncRNA gene	RIKEN cDNA C430014B12 gene
Cpgi477	1	82724730 to 82725666	936		CpG island	CpG island 477
Tssr7624	1	82724881 to 82724895	14	+	TSS region	transcription start site region 7624
Mff	1	82724890 to 82752390	27500	+	protein coding gene	mitochondrial fission factor
Tssr7625	1	82724909 to 82724943	34	+	TSS region	transcription start site region 7625
Tssr7626	1	82724964 to 82724968	4	+	TSS region	transcription start site region 7626
Gm28941	1	82739691 to 82740707	1016	+	sense intronic lncRNA gene	predicted gene 28941
Gm39668	1	82741983 to 82744788	2805	+	lncRNA gene	predicted gene, 39668
Tm4sf20	1	82756649 to 82768456	11807	-	protein coding gene	transmembrane 4 L six family member 20
Tssr12522	1	82767211 to 82767215	4	-	TSS region	transcription start site region 12522
Tssr12523	1	82768449 to 82768465	16	-	TSS region	transcription start site region 12523
Gm47791	1	82770824 to 82771243	419	-	protein coding gene	predicted gene, 47791
Tssr12524	1	82771307 to 82771310	3	-	TSS region	transcription start site region 12524
Gm19257	1	82777028 to 82777210	182	-	pseudogene	predicted gene, 19257
D1Mit383	1	82778395 to 82778517	122		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 383
Tssr7627	1	82785937 to 82785939	2	+	TSS region	transcription start site region 7627
Tssr134	1	82796253 to 82796258	5	-	TSS region	transcription start site region 134
Tssr12525	1	82798450 to 82798462	12	-	TSS region	transcription start site region 12525
Gm36999	1	82806423 to 82807468	1045	-	unclassified gene	predicted gene, 36999
Gm34286	1	82808981 to 82816424	7443	+	lncRNA gene	predicted gene, 34286
Tssr12526	1	82810606 to 82810611	5	-	TSS region	transcription start site region 12526
Tssr7628	1	82819655 to 82819665	10	+	TSS region	transcription start site region 7628
Gm28942	1	82819835 to 82820377	542	+	lincRNA gene	predicted gene 28942
Tssr7629	1	82820120 to 82820125	5	+	TSS region	transcription start site region 7629