MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:82694890-82782390

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Col4a3	1	82586921 to 82722059	135138	+	protein coding gene	collagen, type IV, alpha 3
C430014B12Rik	1	82691928 to 82725169	33241	-	lncRNA gene	RIKEN cDNA C430014B12 gene
D1Mit254	1	82701306 to 82701405	99		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 254
Tssr7623	1	82718932 to 82718938	6	+	TSS region	transcription start site region 7623
Cpgi477	1	82724730 to 82725666	936		CpG island	CpG island 477
Tssr7624	1	82724881 to 82724895	14	+	TSS region	transcription start site region 7624
Mff	1	82724890 to 82752390	27500	+	protein coding gene	mitochondrial fission factor
Tssr7625	1	82724909 to 82724943	34	+	TSS region	transcription start site region 7625
Tssr7626	1	82724964 to 82724968	4	+	TSS region	transcription start site region 7626
Gm28941	1	82739691 to 82740707	1016	+	sense intronic lncRNA gene	predicted gene 28941
Gm39668	1	82741983 to 82744788	2805	+	lncRNA gene	predicted gene, 39668
Tm4sf20	1	82756649 to 82768456	11807	-	protein coding gene	transmembrane 4 L six family member 20
Tssr12522	1	82767211 to 82767215	4	-	TSS region	transcription start site region 12522
Tssr12523	1	82768449 to 82768465	16	-	TSS region	transcription start site region 12523
Gm47791	1	82770824 to 82771243	419	-	protein coding gene	predicted gene, 47791
Tssr12524	1	82771307 to 82771310	3	-	TSS region	transcription start site region 12524
Gm19257	1	82777028 to 82777210	182	-	pseudogene	predicted gene, 19257
D1Mit383	1	82778395 to 82778517	122		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 383