Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:82590468-82740568

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Col4a3 1 82586921 to 82722059 135138 + protein coding gene collagen, type IV, alpha 3
Tssr7620 1 82604046 to 82604057 11 + TSS region transcription start site region 7620
Tssr7621 1 82604073 to 82604093 20 + TSS region transcription start site region 7621
n-R5s213 1 82635013 to 82635110 97 + rRNA gene nuclear encoded rRNA 5S 213
D1Mit382 1 82665468 to 82665568 100 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 382
Tssr7622 1 82676384 to 82676390 6 + TSS region transcription start site region 7622
C430014B12Rik 1 82691928 to 82725169 33241 - lncRNA gene RIKEN cDNA C430014B12 gene
D1Mit254 1 82701306 to 82701405 99 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 254
Tssr7623 1 82718932 to 82718938 6 + TSS region transcription start site region 7623
Cpgi477 1 82724730 to 82725666 936 CpG island CpG island 477
Tssr7624 1 82724881 to 82724895 14 + TSS region transcription start site region 7624
Mff 1 82724890 to 82752390 27500 + protein coding gene mitochondrial fission factor
Tssr7625 1 82724909 to 82724943 34 + TSS region transcription start site region 7625
Tssr7626 1 82724964 to 82724968 4 + TSS region transcription start site region 7626
Gm28941 1 82739691 to 82740707 1016 + sense intronic lncRNA gene predicted gene 28941
Popoa 1 135687641 to 82665468 -53022173 QTL premature ovulation and primary oocyte arrest