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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:80690338-82352341

Filter by:
72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dock10 1 80501073 to 80758527 257454 - protein coding gene dedicator of cytokinesis 10
Tssr12483 1 80709375 to 80709401 26 - TSS region transcription start site region 12483
Tssr12484 1 80709499 to 80709516 17 - TSS region transcription start site region 12484
Tssr12485 1 80710394 to 80710402 8 - TSS region transcription start site region 12485
Tssr12486 1 80715481 to 80715491 10 - TSS region transcription start site region 12486
Tssr12487 1 80715705 to 80715709 4 - TSS region transcription start site region 12487
Tssr12488 1 80726353 to 80726357 4 - TSS region transcription start site region 12488
Gm38062 1 80728809 to 80730664 1855 - unclassified gene predicted gene, 38062
A630081D01Rik 1 80747222 to 80749054 1832 - unclassified gene RIKEN cDNA A630081D01 gene
Tssr12489 1 80755808 to 80755821 13 - TSS region transcription start site region 12489
Tssr12490 1 80756050 to 80756052 2 - TSS region transcription start site region 12490
Tssr7597 1 80757690 to 80757707 17 + TSS region transcription start site region 7597
Tssr7598 1 80757738 to 80757751 13 + TSS region transcription start site region 7598
Cpgi472 1 80757904 to 80758884 980 CpG island CpG island 472
Tssr7599 1 80758146 to 80758157 11 + TSS region transcription start site region 7599
Tssr12491 1 80758481 to 80758499 18 - TSS region transcription start site region 12491
Tssr12492 1 80758516 to 80758532 16 - TSS region transcription start site region 12492
Tssr12493 1 80758536 to 80758558 22 - TSS region transcription start site region 12493
Tssr12494 1 80758662 to 80758680 18 - TSS region transcription start site region 12494
Tssr12495 1 80758691 to 80758709 18 - TSS region transcription start site region 12495
Gm29124 1 80897654 to 80898105 451 - pseudogene predicted gene 29124
Gm28066 1 80949426 to 80949897 471 + pseudogene predicted gene 28066
Nyap2 1 81076950 to 81341764 264814 + protein coding gene neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2
Tssr7600 1 81077217 to 81077252 35 + TSS region transcription start site region 7600
Tssr7601 1 81077256 to 81077265 9 + TSS region transcription start site region 7601
Tssr7602 1 81077274 to 81077327 53 + TSS region transcription start site region 7602
Tssr7603 1 81077484 to 81077499 15 + TSS region transcription start site region 7603
Tssr7604 1 81093982 to 81093989 7 + TSS region transcription start site region 7604
Tssr7605 1 81166877 to 81166901 24 + TSS region transcription start site region 7605
Tssr7606 1 81187502 to 81187505 3 + TSS region transcription start site region 7606
D1Dcr42 1 81249061 to 81249157 96 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 42
D1Dcr56 1 81279851 to 81279946 95 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 56
Tssr7607 1 81323406 to 81323407 1 + TSS region transcription start site region 7607
Gm37210 1 81520338 to 81522341 2003 - unclassified gene predicted gene, 37210
Gm6198 1 81554157 to 81557483 3326 - pseudogene predicted gene 6198
D1Mit439 1 81674399 to 81674522 123 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 439
Sst1 1 81674399 to 87203100 5528701 QTL susceptibility to tuberculosis 1
Gm5530 1 81741985 to 81742969 984 - pseudogene predicted gene 5530
Gm7516 1 81797241 to 81797946 705 + pseudogene predicted gene 7516
Tssr12496 1 81835767 to 81835769 2 - TSS region transcription start site region 12496
Gm37114 1 82105180 to 82106983 1803 + unclassified gene predicted gene, 37114
Mir6344 1 82131916 to 82132019 103 + miRNA gene microRNA 6344
Irs1 1 82233101 to 82291416 58315 - protein coding gene insulin receptor substrate 1
Gm9747 1 82233112 to 82235933 2821 + protein coding gene predicted gene 9747
Tssr12497 1 82236402 to 82236416 14 - TSS region transcription start site region 12497
Tssr12498 1 82237088 to 82237091 3 - TSS region transcription start site region 12498
Tssr12499 1 82281289 to 82281293 4 - TSS region transcription start site region 12499
Cpgi473 1 82283171 to 82283529 358 CpG island CpG island 473
Tssr12500 1 82283817 to 82283819 2 - TSS region transcription start site region 12500
Tssr12501 1 82286816 to 82286829 13 - TSS region transcription start site region 12501
Tssr12502 1 82286840 to 82286874 34 - TSS region transcription start site region 12502
Tssr12503 1 82287239 to 82287247 8 - TSS region transcription start site region 12503
Tssr12504 1 82287373 to 82287387 14 - TSS region transcription start site region 12504
Tssr12505 1 82287442 to 82287462 20 - TSS region transcription start site region 12505
Cpgi474 1 82288774 to 82292008 3234 CpG island CpG island 474
Tssr12506 1 82290898 to 82290917 19 - TSS region transcription start site region 12506
Tssr12507 1 82291114 to 82291174 60 - TSS region transcription start site region 12507
Tssr12508 1 82291370 to 82291394 24 - TSS region transcription start site region 12508
Tssr12509 1 82291597 to 82291617 20 - TSS region transcription start site region 12509
D1Mit183 1 82314261 to 82314386 125 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 183
Cpgi475 1 82316171 to 82317040 869 CpG island CpG island 475
Rhbdd1 1 82316457 to 82445366 128909 + protein coding gene rhomboid domain containing 1
Tssr7608 1 82316567 to 82316630 63 + TSS region transcription start site region 7608
Tssr7609 1 82316645 to 82316656 11 + TSS region transcription start site region 7609
Tssr7610 1 82316663 to 82316674 11 + TSS region transcription start site region 7610
Tssr12510 1 82317587 to 82317596 9 - TSS region transcription start site region 12510
Tssr12511 1 82317643 to 82317652 9 - TSS region transcription start site region 12511
Tssr7611 1 82339078 to 82339086 8 + TSS region transcription start site region 7611
Tssr7612 1 82339087 to 82339115 28 + TSS region transcription start site region 7612
Tssr7613 1 82342988 to 82342998 10 + TSS region transcription start site region 7613
Gm19552 1 82352217 to 82355049 2832 + unclassified gene predicted gene, 19552
Nidd4k 1 147249632 to 82314261 -64935371 QTL Nidd4 on KK-A