Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:80671950-81746764

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dock10 1 80501073 to 80758527 257454 - protein coding gene dedicator of cytokinesis 10
Tssr12483 1 80709375 to 80709401 26 - TSS region transcription start site region 12483
Tssr12484 1 80709499 to 80709516 17 - TSS region transcription start site region 12484
Tssr12485 1 80710394 to 80710402 8 - TSS region transcription start site region 12485
Tssr12486 1 80715481 to 80715491 10 - TSS region transcription start site region 12486
Tssr12487 1 80715705 to 80715709 4 - TSS region transcription start site region 12487
Tssr12488 1 80726353 to 80726357 4 - TSS region transcription start site region 12488
Gm38062 1 80728809 to 80730664 1855 - unclassified gene predicted gene, 38062
A630081D01Rik 1 80747222 to 80749054 1832 - unclassified gene RIKEN cDNA A630081D01 gene
Tssr12489 1 80755808 to 80755821 13 - TSS region transcription start site region 12489
Tssr12490 1 80756050 to 80756052 2 - TSS region transcription start site region 12490
Tssr7597 1 80757690 to 80757707 17 + TSS region transcription start site region 7597
Tssr7598 1 80757738 to 80757751 13 + TSS region transcription start site region 7598
Cpgi472 1 80757904 to 80758884 980 CpG island CpG island 472
Tssr7599 1 80758146 to 80758157 11 + TSS region transcription start site region 7599
Tssr12491 1 80758481 to 80758499 18 - TSS region transcription start site region 12491
Tssr12492 1 80758516 to 80758532 16 - TSS region transcription start site region 12492
Tssr12493 1 80758536 to 80758558 22 - TSS region transcription start site region 12493
Tssr12494 1 80758662 to 80758680 18 - TSS region transcription start site region 12494
Tssr12495 1 80758691 to 80758709 18 - TSS region transcription start site region 12495
Gm29124 1 80897654 to 80898105 451 - pseudogene predicted gene 29124
Gm28066 1 80949426 to 80949897 471 + pseudogene predicted gene 28066
Nyap2 1 81076950 to 81341764 264814 + protein coding gene neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2
Tssr7600 1 81077217 to 81077252 35 + TSS region transcription start site region 7600
Tssr7601 1 81077256 to 81077265 9 + TSS region transcription start site region 7601
Tssr7602 1 81077274 to 81077327 53 + TSS region transcription start site region 7602
Tssr7603 1 81077484 to 81077499 15 + TSS region transcription start site region 7603
Tssr7604 1 81093982 to 81093989 7 + TSS region transcription start site region 7604
Tssr7605 1 81166877 to 81166901 24 + TSS region transcription start site region 7605
Tssr7606 1 81187502 to 81187505 3 + TSS region transcription start site region 7606
D1Dcr42 1 81249061 to 81249157 96 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 42
D1Dcr56 1 81279851 to 81279946 95 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 56
Tssr7607 1 81323406 to 81323407 1 + TSS region transcription start site region 7607
Gm37210 1 81520338 to 81522341 2003 - unclassified gene predicted gene, 37210
Gm6198 1 81554157 to 81557483 3326 - pseudogene predicted gene 6198
Sst1 1 81674399 to 87203100 5528701 QTL susceptibility to tuberculosis 1
D1Mit439 1 81674399 to 81674522 123 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 439
Gm5530 1 81741985 to 81742969 984 - pseudogene predicted gene 5530