Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:80345932-80575660

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm39667	1	80340913 to 80348728	7815	+	lncRNA gene	predicted gene, 39667
Gm29125	1	80382822 to 80386251	3429	+	lincRNA gene	predicted gene 29125
Gm6189	1	80383107 to 80385185	2078	-	pseudogene	predicted gene 6189
Cpgi471	1	80384268 to 80384530	262		CpG island	CpG island 471
Tssr12470	1	80385375 to 80385382	7	-	TSS region	transcription start site region 12470
Tssr12471	1	80405496 to 80405498	2	-	TSS region	transcription start site region 12471
Tssr130	1	80412770 to 80412791	21	+	TSS region	transcription start site region 130
Gm38673	1	80428170 to 80498102	69932	+	lncRNA gene	predicted gene, 38673
Tssr7593	1	80428241 to 80428252	11	+	TSS region	transcription start site region 7593
Tssr7594	1	80445888 to 80445895	7	+	TSS region	transcription start site region 7594
Tssr7595	1	80445914 to 80445922	8	+	TSS region	transcription start site region 7595
Tssr7596	1	80445923 to 80445936	13	+	TSS region	transcription start site region 7596
1700016L21Rik	1	80445932 to 80475660	29728	+	antisense lncRNA gene	RIKEN cDNA 1700016L21 gene
Gm45261	1	80449597 to 80461448	11851	-	protein coding gene	predicted gene 45261
Dock10	1	80501073 to 80758527	257454	-	protein coding gene	dedicator of cytokinesis 10
Tssr12472	1	80544243 to 80544263	20	-	TSS region	transcription start site region 12472
Tssr12473	1	80549849 to 80549853	4	-	TSS region	transcription start site region 12473
Tssr12474	1	80574185 to 80574200	15	-	TSS region	transcription start site region 12474